SMTL ID : 1peg.1 (1 other biounit)

Structural basis for the product specificity of histone lysine methyltransferases

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

hetero-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.50, C.65, C.112, C.116 Ligands: ZN.2, ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.50, A:C.65, A:C.112, A:C.116 ZN.2: 7 residues within 4Å: Chain A: C.50, C.58, C.112, C.118, C.122 Ligands: ZN.1, ZN.3 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.58, A:C.112, A:C.118, A:C.122 ZN.3: 6 residues within 4Å: Chain A: C.50, C.52, C.58, C.63 Ligands: ZN.1, ZN.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.50, A:C.52, A:C.58, A:C.63 ZN.4: 4 residues within 4Å: Chain A: C.228, C.290, C.292, C.297 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.228, A:C.290, A:C.292, A:C.297

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.5: 14 residues within 4Å: Chain A: R.143, W.145, D.186, V.187, Y.188, R.222, F.223, N.225, H.226, Y.267, C.290, L.291, L.301 Chain B: K.9 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.188 Hydrogen bonds: A:W.145, A:W.145, A:D.186, A:V.187, A:V.187, A:N.225, A:H.226, A:H.226, A:Y.267, A:L.291 Salt bridges: A:R.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, X. et al., Structural basis for the product specificity of histone lysine methyltransferases. Mol.Cell (2003)

Release Date

2003-08-05

Peptides

histone H3 methyltransferase DIM-5: A
Histone H3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
P

histone H3 methyltransferase DIM-5

Histone H3

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