- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CU: COPPER (II) ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
NA.2: 6 residues within 4Å:- Chain A: R.47, D.438, M.439, F.444, D.579, I.580
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:I.580, A:I.580
NA.13: 6 residues within 4Å:- Chain B: R.47, D.438, M.439, F.444, D.579, I.580
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:M.439, B:D.579, B:I.580
- 2 x R7U: RUTHENIUM WIRE, 7 CARBON LINKER(Covalent)
R7U.3: 27 residues within 4Å:- Chain A: E.100, F.103, A.133, P.134, L.135, S.136, W.166, Y.294, D.296, Y.300, Y.305, A.306, N.307, S.308, R.334, I.336, T.376, I.377, G.378, N.379, Y.380, F.405
- Chain B: S.354, D.355, L.356, W.357, N.361
8 PLIP interactions:8 interactions with chain A,- Hydrophobic interactions: A:E.100, A:F.103, A:F.103, A:A.133, A:L.135, A:W.166, A:Y.305, A:T.376
R7U.14: 27 residues within 4Å:- Chain A: S.354, D.355, L.356, W.357, N.361
- Chain B: E.100, F.103, A.133, P.134, L.135, S.136, W.166, Y.294, D.296, Y.300, Y.305, A.306, N.307, S.308, R.334, I.336, T.376, I.377, G.378, N.379, Y.380, F.405
8 PLIP interactions:8 interactions with chain B,- Hydrophobic interactions: B:E.100, B:F.103, B:F.103, B:A.133, B:L.135, B:W.166, B:Y.305, B:T.376
- 2 x SO4: SULFATE ION(Non-functional Binders)
SO4.4: 10 residues within 4Å:- Chain A: G.348, I.349, R.365
- Chain B: D.314, C.315, L.316, H.343, E.345, Y.385
- Ligands: GOL.21
9 PLIP interactions:2 interactions with chain A, 7 interactions with chain B- Hydrogen bonds: A:I.349, B:L.316, B:Y.385, B:Y.385
- Salt bridges: A:R.365, B:H.343
- Water bridges: B:H.343, B:H.343, B:K.399
SO4.15: 10 residues within 4Å:- Chain A: D.314, C.315, L.316, H.343, E.345, Y.385
- Chain B: G.348, I.349, R.365
- Ligands: GOL.10
8 PLIP interactions:6 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:L.316, A:Y.385, B:I.349
- Water bridges: A:H.343, A:H.343, A:K.399
- Salt bridges: A:H.343, B:R.365
- 14 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 15 residues within 4Å:- Chain A: R.530, R.531, A.533, P.551, T.552, G.553, F.555, V.556, H.559, S.560, G.561, G.562, A.563, G.564, P.566
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.531, A:T.552, A:S.560, A:A.563
- Water bridges: A:A.533
GOL.6: 7 residues within 4Å:- Chain A: L.125, V.157, D.159, H.168, V.195, P.196, A.197
1 PLIP interactions:1 interactions with chain A- Water bridges: A:V.195
GOL.7: 7 residues within 4Å:- Chain A: Q.517, L.588, D.603, T.604
- Chain B: H.513, K.608, R.610
5 PLIP interactions:3 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:K.608, B:K.608, A:D.603
- Water bridges: B:H.513, A:Q.517
GOL.8: 6 residues within 4Å:- Chain A: D.442, G.443, F.444, T.445, N.497, E.499
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:F.444, A:T.445, A:T.445, A:T.445, A:N.497
GOL.9: 10 residues within 4Å:- Chain A: K.240, R.617, S.618, P.619, V.620, L.621, D.622
- Chain B: L.207, T.208, R.212
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:L.621, A:D.622
- Water bridges: A:S.618
GOL.10: 8 residues within 4Å:- Chain A: E.345, W.347, R.368, K.399
- Chain B: D.346, W.347, G.348
- Ligands: SO4.15
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:E.345, A:R.368, A:E.397
- Water bridges: A:H.343, A:Y.387
GOL.11: 9 residues within 4Å:- Chain A: W.347, N.366, Y.389, D.391, T.393, E.395, K.608
- Chain B: V.602, T.604
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:N.366, A:K.608, B:V.602
- Water bridges: A:W.347, A:D.391, A:D.391, A:T.393
GOL.16: 15 residues within 4Å:- Chain B: R.530, R.531, A.533, P.551, T.552, G.553, F.555, V.556, H.559, S.560, G.561, G.562, A.563, G.564, P.566
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.531, B:T.552, B:S.560, B:A.563
- Water bridges: B:A.533
GOL.17: 7 residues within 4Å:- Chain B: L.125, V.157, D.159, H.168, V.195, P.196, A.197
1 PLIP interactions:1 interactions with chain B- Water bridges: B:V.195
GOL.18: 7 residues within 4Å:- Chain A: H.513, K.608, R.610
- Chain B: Q.517, L.588, D.603, T.604
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:K.608, B:D.603
- Water bridges: A:H.513, B:Q.517, B:D.603
GOL.19: 6 residues within 4Å:- Chain B: D.442, G.443, F.444, T.445, N.497, E.499
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:F.444, B:T.445, B:T.445, B:N.497
GOL.20: 10 residues within 4Å:- Chain A: L.207, T.208, R.212
- Chain B: K.240, R.617, S.618, P.619, V.620, L.621, D.622
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:L.621, B:D.622
- Water bridges: B:S.618
GOL.21: 8 residues within 4Å:- Chain A: D.346, W.347, G.348
- Chain B: E.345, W.347, R.368, K.399
- Ligands: SO4.4
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:E.345, B:R.368, B:E.397, B:K.399
- Water bridges: B:H.343, B:Y.387
GOL.22: 9 residues within 4Å:- Chain A: V.602, T.604
- Chain B: W.347, N.366, Y.389, D.391, T.393, E.395, K.608
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:N.366, B:K.608, A:V.602
- Water bridges: B:W.347, B:D.391, B:D.391, B:T.393
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Langley, D.B. et al., Enantiomer-Specific Binding of Ruthenium(II) Molecular Wires by the Amine Oxidase of Arthrobacter Globiformis. J.Am.Chem.Soc. (2008)
- Release Date
- 2007-05-01
- Peptides
- PHENYLETHYLAMINE OXIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.74 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CU: COPPER (II) ION(Non-covalent)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 2 x R7U: RUTHENIUM WIRE, 7 CARBON LINKER(Covalent)
- 2 x SO4: SULFATE ION(Non-functional Binders)
- 14 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Langley, D.B. et al., Enantiomer-Specific Binding of Ruthenium(II) Molecular Wires by the Amine Oxidase of Arthrobacter Globiformis. J.Am.Chem.Soc. (2008)
- Release Date
- 2007-05-01
- Peptides
- PHENYLETHYLAMINE OXIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A