SMTL ID : 2fme.2 (1 other biounit)

Crystal structure of the mitotic kinesin eg5 (ksp) in complex with mg-adp and (r)-4-(3-hydroxyphenyl)-n,n,7,8-tetramethyl-3,4-dihydroisoquinoline-2(1h)-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: T.112 Ligands: ADP.3 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.112, H2O.1, H2O.1, H2O.3, H2O.3

1 x 3QC: (4R)-4-(3-HYDROXYPHENYL)-N,N,7,8-TETRAMETHYL-3,4-DIHYDROISOQUINOLINE-2(1H)-CARBOXAMIDE(Non-covalent)

3QC.2: 14 residues within 4Å: Chain A: E.116, G.117, E.118, R.119, W.127, D.130, L.132, A.133, I.136, P.137, Y.211, L.214, E.215, F.239 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:E.116, A:E.116, A:W.127, A:A.133, A:I.136, A:I.136, A:P.137, A:Y.211, A:L.214, A:L.214, A:F.239 Hydrogen bonds: A:E.118, A:R.119

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 13 residues within 4Å: Chain A: R.24, R.26, P.27, Q.106, T.107, G.108, T.109, G.110, K.111, T.112, F.113, E.118 Ligands: MG.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:R.24, A:G.108, A:T.109, A:G.110, A:K.111, A:T.112, A:F.113, A:E.118 Water bridges: A:R.24, A:R.26, A:N.29, A:K.111, A:T.112 Salt bridges: A:K.111 pi-Stacking: A:F.113, A:F.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tarby, C.M. et al., Inhibitors of human mitotic kinesin Eg5: Characterization of the 4-phenyl-tetrahydroisoquinoline lead series. Bioorg.Med.Chem.Lett. (2006)

Release Date

2006-04-18

Peptides

Kinesin-like protein KIF11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Kinesin-like protein KIF11

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