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SMTL ID : 2hhe.1

OXYGEN AFFINITY MODULATION BY THE N-TERMINI OF THE BETA CHAINS IN HUMAN AND BOVINE HEMOGLOBIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-2-2-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1:	15 residues within 4Å: Chain A: Y.42, F.43, H.45, F.46, H.58, K.61, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, L.136 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:F.43, A:F.43, A:F.43, A:L.83, A:L.83, A:L.86, A:L.91, A:V.93, A:V.93, A:F.98, A:F.98, A:L.101, A:L.136 Salt bridges: A:H.45, A:K.61, A:K.61 Metal complexes: A:H.87
HEM.2:	15 residues within 4Å: Chain B: T.37, F.40, F.41, H.62, K.65, V.66, A.69, F.70, L.87, H.91, L.95, N.101, F.102, L.105, L.140 18 PLIP interactions: 18 interactions with chain B, Hydrophobic interactions: B:F.40, B:F.40, B:F.41, B:F.41, B:V.66, B:V.66, B:F.70, B:L.87, B:L.95, B:F.102, B:L.105, B:L.105, B:L.140 Water bridges: B:K.65 Salt bridges: B:K.65, B:K.65 pi-Stacking: B:H.62 Metal complexes: B:H.91
HEM.3:	18 residues within 4Å: Chain C: M.32, Y.42, F.43, H.45, F.46, H.58, K.61, A.65, L.83, L.86, H.87, L.91, V.93, N.97, F.98, L.101, V.132, L.136 15 PLIP interactions: 15 interactions with chain C, Hydrophobic interactions: C:F.43, C:K.61, C:L.86, C:L.91, C:L.91, C:V.93, C:V.93, C:N.97, C:F.98, C:V.132, C:L.136 Salt bridges: C:H.45, C:K.61 pi-Stacking: C:H.58 Metal complexes: C:H.87
HEM.4:	19 residues within 4Å: Chain D: L.30, F.40, F.41, F.44, H.62, K.65, V.66, A.69, F.70, F.84, L.87, H.91, L.95, V.97, N.101, F.102, L.105, V.136, L.140 20 PLIP interactions: 20 interactions with chain D, Hydrophobic interactions: D:L.30, D:F.40, D:F.40, D:F.41, D:F.41, D:K.65, D:V.66, D:F.70, D:F.84, D:L.87, D:L.87, D:L.95, D:V.97, D:F.102, D:L.105, D:V.136, D:L.140 Salt bridges: D:K.65 pi-Stacking: D:H.62 Metal complexes: D:H.91

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Fronticelli, C. et al., Chloride ion independence of the Bohr effect in a mutant human hemoglobin beta (V1M+H2deleted). J.Biol.Chem. (1994)

Release Date

1995-01-26

Peptides

HEMOGLOBIN (DEOXY) (ALPHA CHAIN): AC
HEMOGLOBIN (DEOXY) (BETA CHAIN): BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

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NGLPV2D

HEMOGLOBIN (DEOXY) (ALPHA CHAIN)

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HEMOGLOBIN (DEOXY) (BETA CHAIN)

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