SMTL ID : 2hm1.1

Crystal Structure of human beta-secretase (BACE) in the presence of an inhibitor (2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x LIQ: N-{(1S)-2-({(1S,2R)-1-(3,5-DIFLUOROBENZYL)-3-[(3-ETHYLBENZYL)AMINO]-2-HYDROXYPROPYL}AMINO)-2-OXO-1-[(PENTYLSULFONYL)METHYL]ETHYL}NICOTINAMIDE(Non-covalent)

LIQ.1: 24 residues within 4Å: Chain A: G.17, Q.18, G.19, L.36, D.38, G.40, S.41, V.75, P.76, Y.77, T.78, Q.79, G.80, K.113, F.114, I.116, W.121, I.124, Y.204, D.234, G.236, T.237, T.238, R.241 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:L.36, A:L.36, A:V.75, A:Y.77, A:Y.77, A:T.78, A:Q.79, A:F.114, A:I.116, A:I.124, A:Y.204 Hydrogen bonds: A:D.38, A:T.78, A:T.78, A:D.234, A:G.236, A:R.241, A:R.241 pi-Stacking: A:Y.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Freskos, J.N. et al., Design of potent inhibitors of human beta-secretase. Part 2. Bioorg.Med.Chem.Lett. (2007)

Release Date

2007-01-23

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

Related Entries With Identical Sequence