SMTL ID : 4jpe.1

Spirocyclic Beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 (BACE1) Inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x NI: NICKEL (II) ION(Non-covalent)

NI.1: 2 residues within 4Å: Chain A: H.402, H.404 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.402, A:H.404

1 x 1M7: (4R)-2-amino-1,3',3'-trimethyl-7'-(pyrimidin-5-yl)-3',4'-dihydro-2'H-spiro[imidazole-4,1'-naphthalen]-5(1H)-one(Non-covalent)

1M7.2: 16 residues within 4Å: Chain A: G.17, Q.18, G.19, L.36, D.38, G.40, S.41, Y.77, W.82, F.114, I.116, W.121, I.124, D.234, G.236, T.237 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:Y.77, A:F.114, A:W.121, A:I.124 Salt bridges: A:D.38, A:D.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hunt, K.W. et al., Spirocyclic beta-site amyloid precursor protein cleaving enzyme 1 (BACE1) inhibitors: from hit to lowering of cerebrospinal fluid (CSF) amyloid beta in a higher species. J.Med.Chem. (2013)

Release Date

2013-04-10

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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