SMTL ID : 2iqg.1

Crystal Structure of Hydroxyethyl Secondary Amine-based Peptidomimetic Inhibitor of Human Beta-Secretase (BACE)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x F2I: N'-{(1S,2R)-1-(3,5-DIFLUOROBENZYL)-2-HYDROXY-3-[(3-IODOBENZYL)AMINO]PROPYL}-5-METHYL-N,N-DIPROPYLISOPHTHALAMIDE(Non-covalent)

F2I.1: 21 residues within 4Å: Chain A: G.17, Q.18, G.19, L.36, D.38, G.40, S.41, P.76, Y.77, T.78, Q.79, G.80, F.114, I.116, W.121, Y.204, D.234, G.236, T.237, T.238, R.241 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:L.36, A:Y.77, A:Q.79, A:F.114, A:I.116, A:Y.204 Hydrogen bonds: A:D.38, A:T.78, A:T.78, A:Q.79, A:D.234, A:G.236, A:T.238 Water bridges: A:D.234, A:N.239 pi-Stacking: A:Y.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maillard, M.C. et al., Design, Synthesis, and Crystal Structure of Hydroxyethyl Secondary Amine-Based Peptidomimetic Inhibitors of Human beta-Secretase. J.Med.Chem. (2007)

Release Date

2007-02-27

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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