SMTL ID : 3ivh.1

Design and Synthesis of Potent BACE-1 Inhibitors with Cellular Activity: Structure-Activity Relationship of P1 Substituents

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x 1LI: N-[(1S,2R)-3-{[1-(3-TERT-BUTYLPHENYL)CYCLOHEXYL]AMINO}-1-(3,5-DIFLUOROBENZYL)-2-HYDROXYPROPYL]ACETAMIDE(Non-covalent)

1LI.1: 20 residues within 4Å: Chain A: L.36, D.38, G.40, S.41, V.75, P.76, Y.77, T.78, G.80, F.114, I.116, W.121, I.124, R.134, Y.204, I.232, D.234, G.236, T.237, V.338 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.75, A:Y.77, A:I.124, A:Y.204, A:I.232, A:V.338 Hydrogen bonds: A:G.40, A:T.78, A:T.78, A:D.234, A:G.236, A:T.237 Water bridges: A:Q.79 pi-Stacking: A:Y.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sealy, J.M. et al., Design and synthesis of cell potent BACE-1 inhibitors: structure-activity relationship of P1' substituents. Bioorg.Med.Chem.Lett. (2009)

Release Date

2010-01-05

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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