SMTL ID : 4i0h.3 (2 other biounits)

SPR and structural analysis yield insight towards mechanism of inhibition of BACE inhibitors.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 1BL: (2R)-5-{[(2S,3R)-4-{[1-(3-TERT-BUTYLPHENYL)CYCLOHEXYL]AMINO}-1-(3,5-DIFLUOROPHENYL)-3-HYDROXYBUTAN-2-YL]AMINO}-2-HYDROXY-5-OXOPENTANOIC ACID(Non-covalent)

1BL.1: 21 residues within 4Å: Chain A: L.36, D.38, G.40, S.41, V.75, P.76, Y.77, T.78, F.114, I.116, W.121, I.124, Y.204, I.232, D.234, G.236, T.237, T.238, R.241, T.335, V.338 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:V.75, A:Y.77, A:Y.77, A:Y.77, A:I.124, A:Y.204, A:I.232, A:T.335, A:V.338 Hydrogen bonds: A:D.38, A:T.78, A:T.78, A:D.234, A:G.236, A:T.238 Water bridges: A:Q.79, A:N.239 pi-Stacking: A:Y.77

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mondal, K. et al., SPR and structural analysis yield insight towards mechanism of inhibition of BACE inhibitors. To be Published

Release Date

2013-03-06

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Beta-secretase 1

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