SMTL ID : 4i10.1 (1 other biounit)

Structure-based design of novel dihydroisoquinoline BACE-1 inhibitors that do not engage the catalytic aspartates

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.55, N.120 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.55 ZN.2: 2 residues within 4Å: Chain A: H.402, H.404 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.402, A:H.404 ZN.3: 2 residues within 4Å: Chain A: D.137, H.403 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.137, A:D.137, A:H.403, H2O.229

1 x 1BS: 2-{(1S)-1-[(6-CHLORO-3,3-DIMETHYL-3,4-DIHYDROISOQUINOLIN-1-YL)AMINO]-2-PHENYLETHYL}PYRIDO[4,3-D]PYRIMIDIN-4(1H)-ONE(Non-covalent)

1BS.4: 17 residues within 4Å: Chain A: G.17, Q.18, G.19, L.36, D.38, Y.77, Q.79, G.80, K.81, K.113, F.114, W.121, G.236, T.237, T.238, N.239, R.241 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.36, A:Y.77, A:Y.77, A:F.114, A:W.121 Hydrogen bonds: A:T.238, A:T.238, A:N.239 Water bridges: A:Q.79, A:S.331 pi-Cation interactions: A:R.241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bowers, S. et al., Structure-based design of novel dihydroisoquinoline BACE-1 inhibitors that do not engage the catalytic aspartates. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-03-06

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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