SMTL ID : 3bc3.1 (1 other biounit)

Exploring inhibitor binding at the S subsites of cathepsin L

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x OPT: S-benzyl-N-(biphenyl-4-ylacetyl)-L-cysteinyl-N~5~-(diaminomethyl)-D-ornithyl-N-(2-phenylethyl)-L-tyrosinamide(Non-covalent)

OPT.1: 21 residues within 4Å: Chain A: Q.19, G.20, G.23, C.25, G.61, E.63, N.66, G.67, G.68, L.69, M.70, A.135, A.138, G.139, L.144, M.161, D.162, H.163, G.164, W.189, A.214 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:Q.19, A:E.63, A:L.69, A:A.135, A:L.144, A:W.189 Hydrogen bonds: A:Q.19, A:G.68, A:G.68, A:M.161, A:D.162, A:D.162 Water bridges: A:M.70, A:D.71, A:D.160, A:A.214 pi-Stacking: A:W.189, A:W.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chowdhury, S.F. et al., Exploring inhibitor binding at the S' subsites of cathepsin L. J.Med.Chem. (2008)

Release Date

2008-03-18

Peptides

Cathepsin L heavy and light chains: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cathepsin L heavy and light chains

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