SMTL ID : 3cxw.1

Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a beta carboline ligand I

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: K.68, L.121, I.186, D.187 Ligands: 7CP.2 Ligand excluded by PLIP

1 x 7CP: (4R)-7,8-dichloro-1',9-dimethyl-1-oxo-1,2,4,9-tetrahydrospiro[beta-carboline-3,4'-piperidine]-4-carbonitrile(Non-covalent)

7CP.2: 15 residues within 4Å: Chain A: L.45, G.46, F.50, V.53, A.66, K.68, R.123, P.124, E.172, N.173, L.175, I.186, D.187 Chain B: S.9 Ligands: CL.1 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.50, A:V.53, A:A.66, A:L.175, A:I.186 Salt bridges: A:D.187 Water bridges: B:S.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huber, K. et al., 7,8-Dichloro-1-oxo-beta-carbolines as a Versatile Scaffold for the Development of Potent and Selective Kinase Inhibitors with Unusual Binding Modes. J.Med.Chem. (2012)

Release Date

2008-07-15

Peptides

Proto-oncogene serine/threonine-protein kinase Pim-1, Isoform 2: A
Pimtide peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Proto-oncogene serine/threonine-protein kinase Pim-1, Isoform 2

Pimtide peptide

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