SMTL ID : 3dd2.1

Crystal structure of an RNA aptamer bound to human thrombin

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.90 Å
Oligo State
hetero-1-1-mer
Ligands
3 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
1 x 0G6: D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide(Covalent)
2 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)
1 x P6G: HEXAETHYLENE GLYCOL(Non-functional Binders)
6 x ACY: ACETIC ACID(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Long, S.B. et al., Crystal structure of an RNA aptamer bound to thrombin. Rna (2008)
Peptides
Thrombin light chain: A
Thrombin heavy chain: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
L
B
H

Thrombin light chain

Thrombin heavy chain

Related Entries With Identical Sequence

1gj4.1 | 1gj5.1 | 1sb1.1 | 2pw8.1 | 4ayv.1 | 4ayy.1 | 4az2.1 | 4udw.1 | 4ue7.1 | 4ueh.1 | 4ufd.1 | 4ufe.1 | 4uff.1 | 4ufg.1 | 5a2m.1 | 5af9.1 | 5afy.1 | 5afz.1 | 5ahg.1 | 5do4.1