SMTL ID : 3dol.1

Crystal structure of L100I mutant HIV-1 reverse transcriptase in complex with GW695634.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 8 residues within 4Å: Chain A: Q.269, I.270, P.272, T.338, Y.339, Q.340, T.351, G.352 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:I.270, A:Y.339, A:Y.339, A:Q.340, A:T.351 PO4.2: 4 residues within 4Å: Chain A: G.436, A.437, N.460, R.461 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.436, A:G.436, A:A.437, A:N.460 Salt bridges: A:R.461

1 x GWI: N-({4-[({4-chloro-2-[(3-chloro-5-cyanophenyl)carbonyl]phenoxy}acetyl)amino]-3-methylphenyl}sulfonyl)propanamide(Non-covalent)

GWI.3: 19 residues within 4Å: Chain A: I.100, K.101, K.102, K.103, K.104, S.105, V.106, V.179, Y.181, Y.188, V.189, G.190, P.225, F.227, W.229, L.234, H.235, P.236, Y.318 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.100, A:I.100, A:K.103, A:V.106, A:V.106, A:V.106, A:F.227, A:F.227, A:W.229, A:P.236 Hydrogen bonds: A:K.103, A:V.106 pi-Stacking: A:Y.188 Halogen bonds: A:V.179, A:Y.188

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, J. et al., Structural basis for the improved drug resistance profile of new generation benzophenone non-nucleoside HIV-1 reverse transcriptase inhibitors. J.Med.Chem. (2008)

Release Date

2008-08-12

Peptides

Reverse transcriptase/ribonuclease H: A
p66 RT: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Reverse transcriptase/ribonuclease H

p66 RT

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