SMTL ID : 3euv.1

Crystal structure of FTase(ALPHA-subunit; BETA-subunit DELTA C10, W102T, Y154T) in complex with BiotinGPP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: D.297, C.299, Y.361, H.362 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.297, B:D.297, B:C.299, B:H.362

1 x GBO: (2E,6E)-3,7-dimethyl-8-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)octa-2,6-dien-1-yl trihydrogen diphosphate(Non-covalent)

GBO.2: 20 residues within 4Å: Chain A: K.164, Y.166, H.201 Chain B: Y.105, W.106, A.151, T.154, A.155, R.202, C.206, H.248, G.250, Y.251, C.254, R.291, K.294, Y.300, W.303, Y.361, Y.365 16 PLIP interactions: 15 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:R.202, B:Y.251, B:W.303 Hydrogen bonds: B:W.106, B:Y.365 Water bridges: B:R.291, B:R.291, B:K.294, B:K.294, B:L.295 Salt bridges: B:H.248, B:R.291, B:R.291, B:K.294, B:K.294, A:K.164

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, U.T.T. et al., Analysis of the eukaryotic prenylome by isoprenoid affinity tagging. Nat.Chem.Biol. (2009)

Release Date

2009-07-07

Peptides

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha: A
Protein farnesyltransferase subunit beta: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

Protein farnesyltransferase subunit beta

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