SMTL ID : 3j8x.1

High-resolution structure of no-nucleotide kinesin on microtubules

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

GTP.1: 21 residues within 4Å: Chain B: G.10, Q.11, A.12, Q.15, I.16, A.100, N.101, S.140, G.143, G.144, T.145, G.146, T.179, N.206, Y.224, L.227, N.228, I.231 Chain C: L.246, N.247, K.252 18 PLIP interactions: 17 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:Q.11, B:A.12, B:N.101, B:N.101, B:S.140, B:G.144, B:T.145, B:G.146, B:T.179, B:T.179, B:T.179, B:N.206, B:N.228, B:N.228, B:N.228 pi-Stacking: B:Y.224, B:Y.224 Salt bridges: C:K.252

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.2: 14 residues within 4Å: Chain C: G.10, Q.11, C.12, Q.15, N.99, S.138, G.141, G.142, T.143, G.144, N.204, Y.222, L.225, N.226 14 PLIP interactions: 14 interactions with chain C Hydrogen bonds: C:Q.11, C:Q.11, C:C.12, C:Q.15, C:S.138, C:G.142, C:T.143, C:T.143, C:G.144, C:N.204, C:N.204, C:N.226, C:N.226 pi-Stacking: C:Y.222

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shang, Z. et al., High-resolution structures of kinesin on microtubules provide a basis for nucleotide-gated force-generation. Elife (2014)

Release Date

2014-12-10

Peptides

Kinesin-1 heavy chain: A
Tubulin alpha-1B chain: B
Tubulin beta-2B chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
K

B
A

C
B

Kinesin-1 heavy chain

Tubulin alpha-1B chain

Tubulin beta-2B chain

Related Entries With Identical Sequence