SMTL ID : 3k8s.1 (2 other biounits)

Crystal Structure of PPARg in complex with T2384

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-dimer

Ligands

3 x Z27: 2-chloro-N-{3-chloro-4-[(5-chloro-1,3-benzothiazol-2-yl)sulfanyl]phenyl}-4-(trifluoromethyl)benzenesulfonamide(Non-covalent)

Z27.1: 22 residues within 4Å: Chain A: I.57, F.59, I.62, A.73, I.76, F.77, C.80, Q.81, R.83, S.84, Y.122, L.125, V.134, I.136, S.137, L.148, L.151, F.155, F.158, M.159, K.162, H.244 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.59, A:I.62, A:I.76, A:F.77, A:R.83, A:L.125, A:I.136, A:F.158, A:M.159 Hydrogen bonds: A:K.162 Halogen bonds: A:I.57, A:F.155 Z27.2: 13 residues within 4Å: Chain B: E.54, R.75, I.76, G.79, C.80, R.83, V.134, I.136, S.137, M.143, L.148, M.159 Ligands: Z27.3 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:E.54, B:I.136 Hydrogen bonds: B:E.54, B:S.137 Z27.3: 21 residues within 4Å: Chain B: L.23, A.73, I.76, F.77, C.80, Q.81, R.83, S.84, I.121, Y.122, M.124, L.125, L.128, L.148, L.151, F.155, F.158, M.159, K.162, H.244 Ligands: Z27.2 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:F.77, B:M.124, B:L.125, B:L.128, B:F.158, B:M.159 Hydrogen bonds: B:Y.122, B:Y.122, B:K.162 Halogen bonds: B:L.23, B:F.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., T2384, a novel antidiabetic agent with unique peroxisome proliferator-activated receptor gamma binding properties. J.Biol.Chem. (2008)

Release Date

2009-11-03

Peptides

Peroxisome proliferator-activated receptor gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

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