SMTL ID : 3kmg.1 (1 other biounit)

The X-ray Crystal Structure of PPAR-gamma in Complex with an Indole Derivative Modulator, GSK538, and an SRC-1 Peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 538: 4'-[(2,3-dimethyl-5-{[(1S)-1-phenylpropyl]carbamoyl}-1H-indol-1-yl)methyl]biphenyl-2-carboxylic acid(Non-covalent)

538.1: 21 residues within 4Å: Chain A: I.76, F.77, G.79, C.80, Q.81, R.83, S.84, H.118, I.121, Y.122, L.125, L.128, I.136, S.137, F.158, M.159, K.162, H.244, L.248, L.260, Y.268 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.77, A:F.77, A:Q.81, A:R.83, A:I.121, A:I.121, A:L.128, A:I.136, A:F.158, A:F.158, A:L.248, A:L.260 Hydrogen bonds: A:S.84, A:S.84, A:S.137 Salt bridges: A:R.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lamotte, Y. et al., Synthesis and biological activities of novel indole derivatives as potent and selective PPAR-gamma modulators. TO BE PUBLISHED

Release Date

2010-01-12

Peptides

Peroxisome proliferator-activated receptor gamma: A
Steroid Receptor Coactivator-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

Steroid Receptor Coactivator-1

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