SMTL ID : 3nsq.1

Crystal structure of tetrameric RXRalpha-LBD complexed with antagonist danthron

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-tetramer

Ligands

2 x CHZ: 1,8-dihydroxyanthracene-9,10-dione(Non-covalent)

CHZ.1: 5 residues within 4Å: Chain B: F.91, L.104, F.124, C.210, F.215 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:F.91, B:L.104, B:F.124, B:F.124 pi-Stacking: B:F.215 CHZ.2: 5 residues within 4Å: Chain D: F.91, L.104, F.124, C.210, F.215 5 PLIP interactions: 5 interactions with chain D Hydrophobic interactions: D:F.91, D:L.104, D:F.124, D:F.124 pi-Stacking: D:F.215

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Danthron functions as a retinoic X receptor antagonist by stabilizing tetramers of the receptor. J.Biol.Chem. (2011)

Release Date

2010-11-17

Peptides

Retinoid X receptor, alpha: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

Retinoid X receptor, alpha

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