- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.73 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 4 x AZA: 8-AZAXANTHINE(Non-covalent)
AZA.2: 12 residues within 4Å:- Chain A: F.160, L.171, R.177, S.227, V.228, Q.229, N.255
- Chain B: Y.9, I.55, A.57, T.58, D.59
12 PLIP interactions:8 interactions with chain A, 4 interactions with chain B- Hydrogen bonds: A:R.177, A:R.177, A:V.228, A:Q.229, A:Q.229, A:N.255, B:T.58, B:D.59
- pi-Stacking: A:F.160, A:F.160
- Water bridges: B:T.58, B:T.58
AZA.7: 12 residues within 4Å:- Chain A: Y.9, I.55, A.57, T.58, D.59
- Chain B: F.160, L.171, R.177, S.227, V.228, Q.229, N.255
12 PLIP interactions:4 interactions with chain A, 8 interactions with chain B- Hydrogen bonds: A:T.58, A:D.59, B:R.177, B:R.177, B:V.228, B:Q.229, B:Q.229, B:N.255
- Water bridges: A:T.58, A:T.58
- pi-Stacking: B:F.160, B:F.160
AZA.12: 12 residues within 4Å:- Chain C: F.160, L.171, R.177, S.227, V.228, Q.229, N.255
- Chain D: Y.9, I.55, A.57, T.58, D.59
10 PLIP interactions:8 interactions with chain C, 2 interactions with chain D- Hydrogen bonds: C:R.177, C:R.177, C:V.228, C:Q.229, C:Q.229, C:N.255, D:T.58, D:D.59
- pi-Stacking: C:F.160, C:F.160
AZA.17: 12 residues within 4Å:- Chain C: Y.9, I.55, A.57, T.58, D.59
- Chain D: F.160, L.171, R.177, S.227, V.228, Q.229, N.255
10 PLIP interactions:8 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:R.177, D:R.177, D:V.228, D:Q.229, D:Q.229, D:N.255, C:T.58, C:D.59
- pi-Stacking: D:F.160, D:F.160
- 8 x XE: XENON(Non-covalent)
XE.3: 3 residues within 4Å:- Chain A: T.231, L.253
- Ligands: N2O.5
No protein-ligand interaction detected (PLIP)XE.4: 4 residues within 4Å:- Chain A: V.16, K.18, Y.31, M.33
No protein-ligand interaction detected (PLIP)XE.8: 3 residues within 4Å:- Chain B: T.231, L.253
- Ligands: N2O.10
No protein-ligand interaction detected (PLIP)XE.9: 4 residues within 4Å:- Chain B: V.16, K.18, Y.31, M.33
No protein-ligand interaction detected (PLIP)XE.13: 3 residues within 4Å:- Chain C: T.231, L.253
- Ligands: N2O.15
No protein-ligand interaction detected (PLIP)XE.14: 4 residues within 4Å:- Chain C: V.16, K.18, Y.31, M.33
No protein-ligand interaction detected (PLIP)XE.18: 3 residues within 4Å:- Chain D: T.231, L.253
- Ligands: N2O.20
No protein-ligand interaction detected (PLIP)XE.19: 4 residues within 4Å:- Chain D: V.16, K.18, Y.31, M.33
No protein-ligand interaction detected (PLIP)- 4 x N2O: NITROUS OXIDE(Non-covalent)
N2O.5: 7 residues within 4Å:- Chain A: L.179, F.220, T.231, M.232, M.235, L.253
- Ligands: XE.3
No protein-ligand interaction detected (PLIP)N2O.10: 7 residues within 4Å:- Chain B: L.179, F.220, T.231, M.232, M.235, L.253
- Ligands: XE.8
No protein-ligand interaction detected (PLIP)N2O.15: 7 residues within 4Å:- Chain C: L.179, F.220, T.231, M.232, M.235, L.253
- Ligands: XE.13
No protein-ligand interaction detected (PLIP)N2O.20: 7 residues within 4Å:- Chain D: L.179, F.220, T.231, M.232, M.235, L.253
- Ligands: XE.18
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Marassio, G. et al., Pressure-response analysis of anesthetic gases xenon and nitrous oxide on urate oxidase: a crystallographic study. Faseb J. (2011)
- Release Date
- 2011-04-06
- Peptides
- Uricase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.73 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NA: SODIUM ION(Non-functional Binders)
- 4 x AZA: 8-AZAXANTHINE(Non-covalent)
- 8 x XE: XENON(Non-covalent)
- 4 x N2O: NITROUS OXIDE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Marassio, G. et al., Pressure-response analysis of anesthetic gases xenon and nitrous oxide on urate oxidase: a crystallographic study. Faseb J. (2011)
- Release Date
- 2011-04-06
- Peptides
- Uricase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A