- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x RET: RETINAL(Covalent)
- 2 x 22B: BACTERIORUBERIN(Non-covalent)
22B.2: 12 residues within 4Å:- Chain A: I.49, V.53, T.56, K.65, V.69, I.72
- Chain C: T.151, F.155, A.185, V.189, I.193, E.197
11 PLIP interactions:5 interactions with chain A, 6 interactions with chain C- Hydrophobic interactions: A:I.49, A:V.69, A:I.72, C:T.151, C:F.155, C:F.155, C:A.185, C:V.189, C:I.193
- Hydrogen bonds: A:K.65, A:K.65
22B.7: 14 residues within 4Å:- Chain A: T.147, T.151, F.155, V.189, I.193, E.197
- Chain B: G.46, I.49, V.53, T.56, K.65, V.69, I.72
- Ligands: BR.4
12 PLIP interactions:6 interactions with chain A, 6 interactions with chain B- Hydrophobic interactions: A:T.147, A:T.151, A:F.155, A:F.155, A:V.189, A:I.193, B:I.49, B:V.53, B:V.69, B:I.72
- Hydrogen bonds: B:K.65, B:K.65
- 6 x BR: BROMIDE ION(Non-covalent)
BR.3: 6 residues within 4Å:- Chain A: V.77, S.81, T.126, W.127, S.130, K.256
Ligand excluded by PLIPBR.4: 5 residues within 4Å:- Chain A: N.145, T.147
- Chain B: P.62, K.65
- Ligands: 22B.7
Ligand excluded by PLIPBR.5: 5 residues within 4Å:- Chain A: P.62, K.65
- Chain C: N.145, T.147, K.148
Ligand excluded by PLIPBR.8: 5 residues within 4Å:- Chain B: S.81, T.126, W.127, S.130, K.256
Ligand excluded by PLIPBR.10: 5 residues within 4Å:- Chain B: N.145, T.147, K.148
- Chain C: P.62, K.65
Ligand excluded by PLIPBR.11: 5 residues within 4Å:- Chain C: S.81, T.126, W.127, S.130, K.256
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanada, S. et al., Crystal structures of an O-like blue form and an anion-free yellow form of pharaonis halorhodopsin. J.Mol.Biol. (2011)
- Release Date
- 2011-08-31
- Peptides
- Halorhodopsin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
D - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x RET: RETINAL(Covalent)
- 2 x 22B: BACTERIORUBERIN(Non-covalent)
- 6 x BR: BROMIDE ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanada, S. et al., Crystal structures of an O-like blue form and an anion-free yellow form of pharaonis halorhodopsin. J.Mol.Biol. (2011)
- Release Date
- 2011-08-31
- Peptides
- Halorhodopsin: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
D - Membrane
-
We predict this structure to be a membrane protein.