SMTL ID : 3qf9.1

Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a furan-thiazolidinedione ligand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NM8: 6-{5-[(Z)-(2,4-dioxo-1,3-thiazolidin-5-ylidene)methyl]furan-2-yl}-N-{3-[(4-ethylpiperazin-1-yl)methyl]-5-(trifluoromethyl)phenyl}naphthalene-1-carboxamide(Non-covalent)

NM8.1: 12 residues within 4Å: Chain A: L.45, F.50, V.53, A.66, K.68, I.105, L.121, E.122, V.127, L.175, I.186, D.187 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:L.45, A:A.66, A:I.105, A:L.121, A:V.127, A:L.175, A:I.186 Hydrogen bonds: A:V.127, A:D.187, A:D.187 Water bridges: A:K.68, A:F.188

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 2 residues within 4Å: Chain A: S.55, G.56 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.55

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: F.202, R.206, W.213 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Crystal structure of human proto-oncogene serine threonine kinase (PIM1) in complex with a consensus peptide and a furan-thiazolidinedione ligand. To be Published

Release Date

2011-03-02

Peptides

Proto-oncogene serine/threonine-protein kinase pim-1: A
pimtide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Proto-oncogene serine/threonine-protein kinase pim-1

pimtide

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