SMTL ID : 3uh2.3 (2 other biounits)

Tankyrase-1 in complexed with PJ34

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.131, H.134, C.139, C.142 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.131, A:H.134, A:C.139, A:C.142 ZN.8: 4 residues within 4Å: Chain B: C.131, H.134, C.139, C.142 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.131, B:H.134, B:C.139, B:C.142

4 x P34: N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE(Non-covalent)

P34.2: 12 residues within 4Å: Chain A: F.80, H.81, G.82, G.103, Y.110, F.111, A.112, K.117, S.118, Y.121, I.125, E.188 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.110, A:A.112, A:K.117, A:Y.121, A:Y.121, A:I.125 Hydrogen bonds: A:G.82, A:G.82 pi-Stacking: A:Y.121, A:Y.121 P34.3: 7 residues within 4Å: Chain A: F.85, A.88, I.89, F.94, D.95, H.98, I.109 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.85, A:A.88, A:H.98, A:I.109 Hydrogen bonds: A:D.95 pi-Stacking: A:H.98 P34.9: 12 residues within 4Å: Chain B: F.80, H.81, G.82, G.103, Y.110, F.111, A.112, K.117, S.118, Y.121, I.125, E.188 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:Y.110, B:A.112, B:K.117, B:Y.121, B:Y.121, B:I.125, B:E.188 Hydrogen bonds: B:G.82, B:G.82 pi-Stacking: B:Y.121, B:Y.121 P34.10: 7 residues within 4Å: Chain B: F.85, A.88, I.89, F.94, D.95, H.98, I.109 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:F.85, B:F.85, B:A.88, B:H.98, B:I.109 Hydrogen bonds: B:D.95 Water bridges: B:G.93 pi-Stacking: B:H.98

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.4: 6 residues within 4Å: Chain A: H.73, H.74, N.75, E.76 Chain B: H.71, H.73 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:H.74, A:N.75, A:E.76 Salt bridges: B:H.73 SO4.5: 5 residues within 4Å: Chain A: R.27, H.29, R.30, K.117, Q.120 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.30, A:Q.120 Water bridges: A:D.31, A:Q.120 Salt bridges: A:R.27, A:H.29, A:R.30, A:K.117 SO4.6: 4 residues within 4Å: Chain A: N.40, R.41, K.209, P.210 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.209 SO4.7: 5 residues within 4Å: Chain A: I.86, N.87, I.90, Q.145, L.202 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.145, A:Q.145 SO4.11: 5 residues within 4Å: Chain B: R.27, H.29, R.30, K.117, Q.120 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:R.30, B:Q.120, B:Q.120 Water bridges: B:K.117 Salt bridges: B:R.27, B:H.29, B:R.30, B:K.117

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kirby, C.A. et al., Structure of human tankyrase 1 in complex with small-molecule inhibitors PJ34 and XAV939. Acta Crystallogr.,Sect.F (2012)

Release Date

2012-02-15

Peptides

Tankyrase-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tankyrase-1

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