SMTL ID : 4li7.1 (1 other biounit)

TANKYRASE-1 complexed with small molecule inhibitor 4-chloro-5-cyano-N-{2-[4-(4-fluorobenzoyl)piperidin-1-yl]ethyl}-2-methoxybenzamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.27, H.29, R.30, K.117, Q.120, Y.186 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.30, A:Q.120 Water bridges: A:D.31, A:Q.120 Salt bridges: A:R.27, A:H.29, A:R.30, A:K.117 SO4.2: 4 residues within 4Å: Chain A: H.73, H.74, N.75, E.76 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.74, A:N.75, A:E.76 Salt bridges: A:H.73, A:H.74 SO4.3: 4 residues within 4Å: Chain A: N.40, K.209, P.210, E.211 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.40, A:K.209, A:E.211

1 x NA: SODIUM ION(Non-functional Binders)

NA.4: 4 residues within 4Å: Chain A: H.81, I.109, Y.110 Ligands: 1XP.5 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.110 Water bridges: A:G.108

1 x 1XP: 4-chloro-5-cyano-N-{2-[4-(4-fluorobenzoyl)piperidin-1-yl]ethyl}-2-methoxybenzamide(Non-covalent)

1XP.5: 20 residues within 4Å: Chain A: F.80, H.81, G.82, S.83, F.85, A.88, I.89, K.92, G.93, F.94, D.95, H.98, A.99, Y.110, K.117, S.118, Y.121, I.125, E.188 Ligands: NA.4 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.85, A:F.85, A:F.85, A:A.88, A:I.89, A:D.95, A:H.98, A:Y.121 Hydrogen bonds: A:G.82, A:D.95 pi-Stacking: A:H.98, A:Y.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shultz, M.D. et al., Identification of NVP-TNKS656: The Use of Structure-Efficiency Relationships To Generate a Highly Potent, Selective, and Orally Active Tankyrase Inhibitor. J.Med.Chem. (2013)

Release Date

2013-08-14

Peptides

Tankyrase-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tankyrase-1

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