SMTL ID : 4li6.1 (1 other biounit)

TANKYRASE-1 Complexed with small molecule inhibitor N-[(4-oxo-3,4-dihydroquinazolin-2-yl)methyl]-3-phenyl-N-(thiophen-2-ylmethyl)propanamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.131, H.134, C.139, C.142 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.131, A:H.134, A:C.139, A:C.142

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: H.73, H.74, N.75 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:H.74, A:N.75 Water bridges: A:E.76, A:E.76 Salt bridges: A:H.73, A:H.74 SO4.3: 5 residues within 4Å: Chain A: R.27, H.29, R.30, K.117, Q.120 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:R.30, A:Q.120 Water bridges: A:D.31, A:Y.186 Salt bridges: A:R.27, A:H.29, A:R.30, A:K.117 SO4.4: 1 residues within 4Å: Chain A: H.73 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.73 SO4.5: 3 residues within 4Å: Chain A: N.40, P.210, E.211 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.40, A:E.211 Water bridges: A:N.40, A:K.209

1 x 1XO: N-[(4-oxo-3,4-dihydroquinazolin-2-yl)methyl]-3-phenyl-N-(thiophen-2-ylmethyl)propanamide(Non-covalent)

1XO.6: 20 residues within 4Å: Chain A: F.80, H.81, G.82, S.83, P.84, F.85, D.95, H.98, A.99, Y.100, G.108, I.109, Y.110, F.111, A.112, K.117, S.118, Y.121, I.125, E.188 16 PLIP interactions: 16 interactions with chain A Hydrophobic interactions: A:F.85, A:Y.100, A:Y.100, A:I.109, A:I.109, A:Y.110, A:Y.110, A:A.112, A:K.117, A:Y.121, A:I.125, A:E.188 Hydrogen bonds: A:G.82, A:G.82, A:Y.110 pi-Stacking: A:Y.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shultz, M.D. et al., Identification of NVP-TNKS656: The Use of Structure-Efficiency Relationships To Generate a Highly Potent, Selective, and Orally Active Tankyrase Inhibitor. J.Med.Chem. (2013)

Release Date

2013-08-14

Peptides

Tankyrase-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tankyrase-1

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