SMTL ID : 3unj.1

CDK2 in complex with inhibitor YL1-038-31

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x 0BX: 4-{[4-(phenylamino)pyrimidin-2-yl]amino}benzoic acid(Non-covalent)

0BX.1: 15 residues within 4Å: Chain A: I.10, V.18, A.31, F.80, E.81, F.82, L.83, H.84, Q.85, D.86, K.89, Q.131, N.132, L.134, D.145 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:I.10, A:V.18, A:A.31, A:F.82, A:L.134, A:L.134, A:D.145 Hydrogen bonds: A:L.83, A:L.83 Salt bridges: A:K.89 pi-Stacking: A:F.80

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 8 residues within 4Å: Chain A: G.13, T.14, Y.15, K.33, D.127, K.129, N.132, D.145 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:T.14, A:Y.15, A:D.127, A:N.132, A:N.132, A:D.145, A:D.145, A:D.145 Salt bridges: A:K.33, A:K.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Martin, M.P. et al., A Novel Mechanism by Which Small Molecule Inhibitors Induce the DFG Flip in Aurora A. Acs Chem.Biol. (2012)

Release Date

2012-01-25

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2

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