SMTL ID : 4c4s.1

Structure of beta-phosphoglucomutase in complex with an alpha- fluorophosphonate analogue of beta-glucose-1-phosphate and magnesium trifluoride

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x GRX: (1R)-1,5-anhydro-1-[(S)-fluoro(phosphono)methyl]-D-glucitol(Non-covalent)

GRX.1: 17 residues within 4Å: Chain A: D.10, H.20, W.24, L.44, K.45, G.46, V.47, S.48, R.49, S.52, K.76, S.114, A.115, S.116, K.117, N.118 Ligands: MGF.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:L.44, A:G.46, A:R.49, A:R.49, A:S.52, A:K.76, A:K.117, A:N.118 Water bridges: A:R.49, A:N.77, A:S.116

1 x MGF: TRIFLUOROMAGNESATE(Non-covalent)

MGF.2: 9 residues within 4Å: Chain A: D.8, L.9, D.10, G.46, S.114, A.115, K.145 Ligands: GRX.1, MG.3 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.8

1 x MG: MAGNESIUM ION(Non-covalent)

MG.3: 4 residues within 4Å: Chain A: D.8, D.10, D.170 Ligands: MGF.2 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.8, A:D.10, A:D.170, H2O.1, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, Y. et al., Alpha-Fluorophosphonates Reveal How a Phosphomutase Conserves Transition State Conformation Over Hexose Recognition in its Two-Step Reaction. Proc.Natl.Acad.Sci.USA (2014)

Release Date

2014-07-16

Peptides

BETA-PHOSPHOGLUCOMUTASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

BETA-PHOSPHOGLUCOMUTASE

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