SMTL ID : 4crt.1

Crystal structure of human monoamine oxidase B in complex with the multi-target inhibitor ASS234

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Covalent)

FAD.1: 38 residues within 4Å: Chain A: V.10, G.11, G.12, G.13, I.14, S.15, L.33, E.34, A.35, R.36, G.40, G.41, R.42, T.43, L.56, G.57, G.58, S.59, Y.60, R.233, P.234, V.235, A.263, I.264, P.265, L.268, V.294, W.388, Y.393, C.397, Y.398, G.425, T.426, G.434, Y.435, M.436, A.439 Ligands: ASS.2 32 PLIP interactions: 32 interactions with chain A Hydrophobic interactions: A:V.294, A:W.388, A:Y.398, A:Y.398 Hydrogen bonds: A:G.12, A:G.13, A:S.15, A:A.35, A:R.36, A:R.36, A:R.42, A:G.58, A:S.59, A:Y.60, A:Y.60, A:V.235, A:V.235, A:T.426, A:T.426, A:G.434, A:M.436 Water bridges: A:I.14, A:G.16, A:G.41, A:R.42, A:R.42, A:T.43, A:Q.65, A:E.437 Salt bridges: A:R.42, A:R.42 pi-Stacking: A:Y.393 FAD.3: 37 residues within 4Å: Chain B: V.10, G.11, G.12, G.13, I.14, S.15, L.33, E.34, A.35, R.36, G.40, G.41, R.42, T.43, L.56, G.57, G.58, S.59, Y.60, R.233, P.234, V.235, A.263, I.264, P.265, V.294, W.388, Y.393, C.397, Y.398, G.425, T.426, G.434, Y.435, M.436, A.439 Ligands: ASS.4 31 PLIP interactions: 31 interactions with chain B Hydrophobic interactions: B:V.294, B:W.388, B:Y.398, B:Y.398 Hydrogen bonds: B:G.12, B:G.13, B:S.15, B:A.35, B:R.36, B:R.42, B:G.58, B:S.59, B:Y.60, B:Y.60, B:V.235, B:V.235, B:T.426, B:G.434, B:M.436 Water bridges: B:I.14, B:G.16, B:E.34, B:G.41, B:R.42, B:R.42, B:T.43, B:Q.65, B:E.437 Salt bridges: B:R.42, B:R.42 pi-Stacking: B:Y.393

2 x ASS: (E)-N-methyl-N-[[1-methyl-5-[3-[1-(phenylmethyl)piperidin-4-yl]propoxy]indol-2-yl]methyl]prop-1-en-1-amine(Non-covalent)

ASS.2: 9 residues within 4Å: Chain A: L.171, C.172, I.199, Q.206, Y.326, F.343, Y.398, Y.435 Ligands: FAD.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.171, A:L.171, A:I.199, A:F.343, A:Y.398, A:Y.398 pi-Stacking: A:Y.326 ASS.4: 8 residues within 4Å: Chain B: L.171, C.172, I.199, Q.206, Y.326, F.343, Y.398 Ligands: FAD.3 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.171, B:L.171, B:L.171, B:I.199, B:F.343, B:Y.398, B:Y.398 pi-Stacking: B:Y.326

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Esteban, G. et al., Kinetic and Structural Analysis of the Irreversible Inhibition of Human Monoamine Oxidases by Ass234, a Multi-Target Compound Designed for Use in Alzheimer'S Disease. Biochim.Biophys.Acta (2014)

Release Date

2014-04-02

Peptides

AMINE OXIDASE [FLAVIN-CONTAINING] B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

AMINE OXIDASE [FLAVIN-CONTAINING] B

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