SMTL ID : 4d5l.1

Cryo-EM structures of ribosomal 80S complexes with termination factors and cricket paralysis virus IRES reveal the IRES in the translocated state

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY 9.00 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
None
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH
Citation
Muhs, M. et al., Cryo-Em of Ribosomal 80S Complexes with Termination Factors Reveals the Translocated Cricket Paralysis Virus Ires. Mol.Cell (2015)
Release Date
2015-02-04
Peptides
40S RIBOSOMAL PROTEIN ES26: B
40S RIBOSOMAL PROTEIN ES27: C
40S RIBOSOMAL PROTEIN ES28: D
40S RIBOSOMAL PROTEIN US14: E
40S RIBOSOMAL PROTEIN ES30: F
40S RIBOSOMAL PROTEIN ES31: G
40S RIBOSOMAL PROTEIN RACK1: H
40S RIBOSOMAL PROTEIN ES7: I
40S RIBOSOMAL PROTEIN ES8: J
40S RIBOSOMAL PROTEIN US4: K
40S RIBOSOMAL PROTEIN ES10: L
40S RIBOSOMAL PROTEIN US17: M
40S RIBOSOMAL PROTEIN ES12: N
40S RIBOSOMAL PROTEIN US15: O
40S RIBOSOMAL PROTEIN US11: P
40S RIBOSOMAL PROTEIN US19: Q
40S RIBOSOMAL PROTEIN US9: R
40S RIBOSOMAL PROTEIN ES17: S
40S RIBOSOMAL PROTEIN US13: T
40S RIBOSOMAL PROTEIN ES19: U
40S RIBOSOMAL PROTEIN US10: V
40S RIBOSOMAL PROTEIN ES21: W
40S RIBOSOMAL PROTEIN US8: X
40S RIBOSOMAL PROTEIN US12: Y
40S RIBOSOMAL PROTEIN ES24: Z
40S RIBOSOMAL PROTEIN ES25: 0
40S RIBOSOMAL PROTEIN US2: 1
40S RIBOSOMAL PROTEIN ES1: 2
40S RIBOSOMAL PROTEIN US5: 3
40S RIBOSOMAL PROTEIN US3: 4
40S RIBOSOMAL PROTEIN ES4: 5
40S RIBOSOMAL PROTEIN US7: 6
40S RIBOSOMAL PROTEIN ES6: 7
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
B
A
C
B
D
C
E
D
F
E
G
F
H
G
I
H
J
I
K
J
L
K
M
L
N
M
O
N
P
O
Q
P
R
Q
S
R
T
S
U
T
V
U
W
V
X
W
Y
X
Z
Y
0
Z
1
a
2
b
3
c
4
d
5
e
6
f
7
g

40S RIBOSOMAL PROTEIN ES26

40S RIBOSOMAL PROTEIN ES27

40S RIBOSOMAL PROTEIN ES28

40S RIBOSOMAL PROTEIN US14

40S RIBOSOMAL PROTEIN ES30

40S RIBOSOMAL PROTEIN ES31

40S RIBOSOMAL PROTEIN RACK1

40S RIBOSOMAL PROTEIN ES7

40S RIBOSOMAL PROTEIN ES8

40S RIBOSOMAL PROTEIN US4

40S RIBOSOMAL PROTEIN ES10

40S RIBOSOMAL PROTEIN US17

40S RIBOSOMAL PROTEIN ES12

40S RIBOSOMAL PROTEIN US15

40S RIBOSOMAL PROTEIN US11

40S RIBOSOMAL PROTEIN US19

40S RIBOSOMAL PROTEIN US9

40S RIBOSOMAL PROTEIN ES17

40S RIBOSOMAL PROTEIN US13

40S RIBOSOMAL PROTEIN ES19

40S RIBOSOMAL PROTEIN US10

40S RIBOSOMAL PROTEIN ES21

40S RIBOSOMAL PROTEIN US8

40S RIBOSOMAL PROTEIN US12

40S RIBOSOMAL PROTEIN ES24

40S RIBOSOMAL PROTEIN ES25

40S RIBOSOMAL PROTEIN US2

40S RIBOSOMAL PROTEIN ES1

40S RIBOSOMAL PROTEIN US5

40S RIBOSOMAL PROTEIN US3

40S RIBOSOMAL PROTEIN ES4

40S RIBOSOMAL PROTEIN US7

40S RIBOSOMAL PROTEIN ES6

Related Entries With Identical Sequence

4d61.1 | 4kzx.1 | 4kzy.1 | 4kzz.1 | 4v5z.1 | 4v5z.3 | 4v5z.6 | 4v5z.7 | 4v5z.8 | 4v5z.9 | 4v5z.10 | 4v5z.12 | 4v5z.13 | 4v5z.15 | 4v5z.16 | 5a2q.1 | 5aj0.46 | 5aj0.47 | 5aj0.48 | 5aj0.49 | 5aj0.50 | 5aj0.51 | 5aj0.52 | 5aj0.53 | 5aj0.54 | 5aj0.55 | 5aj0.56 | 5aj0.57 | 5aj0.58 | 5aj0.59  more...