SMTL ID : 4keh.1

Crosslinked Crystal Structure of Type II Fatty Synthase Dehydratase, FabA, and Acyl Carrier Protein, AcpP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 1R3: N-{3-[dihydroxy(nonyl)-lambda~4~-sulfanyl]propyl}-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide(Covalent)

1R3.1: 27 residues within 4Å: Chain A: H.70, F.71, V.76, M.77, P.78, G.79, F.113, T.114, G.115, Q.116, Y.155 Chain B: P.26, Q.27, L.28, D.84, W.87, Q.88, G.91, F.92, G.103, R.104, A.105, R.137, F.165 Chain C: D.35, S.36, L.37 8 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A, 4 interactions with chain B Hydrogen bonds: C:D.35, C:S.36, A:F.113, B:A.105 Water bridges: A:V.117 Hydrophobic interactions: B:P.26, B:R.104 Salt bridges: B:R.137 1R3.2: 24 residues within 4Å: Chain A: P.26, Q.27, D.84, W.87, Q.88, G.91, G.103, R.104, A.105, L.106 Chain B: H.70, F.71, V.76, M.77, P.78, G.79, F.113, T.114, G.115, Q.116, Y.155 Chain D: D.35, S.36, L.37 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain D Hydrophobic interactions: A:P.26, A:R.104 Hydrogen bonds: A:A.105, D:D.35, D:S.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, C. et al., Trapping the dynamic acyl carrier protein in fatty acid biosynthesis. Nature (2014)

Release Date

2013-12-25

Peptides

N-{3-[DIHYDROXY(NONYL)-LAMBDA~4~-SULFANYL]PROPYL}-N~3~-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANINAMIDE: AB
Acyl carrier protein: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

N-{3-[DIHYDROXY(NONYL)-LAMBDA~4~-SULFANYL]PROPYL}-N~3~-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANINAMIDE

Acyl carrier protein

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