SMTL ID : 4o62.1

CW-type zinc finger of ZCWPW2 in complex with the amino terminus of histone H3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

hetero-oligomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.14, C.19, C.41, C.52 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.14, A:C.19, A:C.41, A:C.52 ZN.13: 4 residues within 4Å: Chain B: C.14, C.19, C.41, C.52 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.14, B:C.19, B:C.41, B:C.52 ZN.21: 4 residues within 4Å: Chain C: C.14, C.19, C.41, C.52 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.14, C:C.19, C:C.41, C:C.52

27 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.2: 1 residues within 4Å: Chain A: H.35 Ligand excluded by PLIP UNX.3: 1 residues within 4Å: Chain A: E.17 Ligand excluded by PLIP UNX.4: 2 residues within 4Å: Chain A: S.26, T.45 Ligand excluded by PLIP UNX.5: 4 residues within 4Å: Chain A: Q.13, L.20, W.22 Ligands: UNX.6 Ligand excluded by PLIP UNX.6: 4 residues within 4Å: Chain A: W.22, E.56 Chain C: Y.6 Ligands: UNX.5 Ligand excluded by PLIP UNX.7: 3 residues within 4Å: Chain A: E.15, N.16, E.17 Ligand excluded by PLIP UNX.8: 4 residues within 4Å: Chain A: V.33, D.34, H.35, E.37 Ligand excluded by PLIP UNX.9: 3 residues within 4Å: Chain A: F.42, N.51, C.52 Ligand excluded by PLIP UNX.10: 2 residues within 4Å: Chain A: N.16, N.18 Ligand excluded by PLIP UNX.11: 3 residues within 4Å: Chain A: E.3, N.4, Y.6 Ligand excluded by PLIP UNX.12: 2 residues within 4Å: Chain A: E.3, N.4 Ligand excluded by PLIP UNX.14: 3 residues within 4Å: Chain B: R.48, I.54 Ligands: UNX.16 Ligand excluded by PLIP UNX.15: 4 residues within 4Å: Chain B: N.4, M.5, Y.6, V.7 Ligand excluded by PLIP UNX.16: 3 residues within 4Å: Chain B: S.47, I.54 Ligands: UNX.14 Ligand excluded by PLIP UNX.17: 1 residues within 4Å: Chain B: N.18 Ligand excluded by PLIP UNX.18: 4 residues within 4Å: Chain B: K.9, L.24, L.25, D.46 Ligand excluded by PLIP UNX.19: 3 residues within 4Å: Chain B: T.45, D.46, S.47 Ligand excluded by PLIP UNX.20: 2 residues within 4Å: Chain B: S.26, S.27 Ligand excluded by PLIP UNX.22: 4 residues within 4Å: Chain C: K.9, S.26, S.27 Ligands: UNX.28 Ligand excluded by PLIP UNX.23: 4 residues within 4Å: Chain B: S.55 Chain C: V.33, D.34, H.35 Ligand excluded by PLIP UNX.24: 2 residues within 4Å: Chain C: E.15, E.17 Ligand excluded by PLIP UNX.25: 4 residues within 4Å: Chain A: V.10, W.11 Chain B: N.51 Chain C: N.8 Ligand excluded by PLIP UNX.26: 3 residues within 4Å: Chain C: E.3, N.4, Y.6 Ligand excluded by PLIP UNX.27: 2 residues within 4Å: Chain C: Q.13, L.20 Ligand excluded by PLIP UNX.28: 4 residues within 4Å: Chain C: S.26, S.27, E.28 Ligands: UNX.22 Ligand excluded by PLIP UNX.29: 6 residues within 4Å: Chain C: V.33, D.34, E.37, P.38, W.39, M.43 Ligand excluded by PLIP UNX.30: 4 residues within 4Å: Chain C: Y.40, C.41, F.42, C.52 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Y. et al., Family-wide Characterization of Histone Binding Abilities of Human CW Domain-containing Proteins. J.Biol.Chem. (2016)

Release Date

2014-03-26

Peptides

Zinc finger CW-type PWWP domain protein 2: ABC
Histone H3.3: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Zinc finger CW-type PWWP domain protein 2

Histone H3.3

Related Entries With Identical Sequence