SMTL ID : 4tmp.2 (1 other biounit)

Crystal structure of AF9 YEATS bound to H3K9ac peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: H.57, L.58, E.60, P.65, K.66 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.58 EDO.2: 4 residues within 4Å: Chain A: H.57, P.87, E.89, R.102 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.89, A:R.102 EDO.3: 6 residues within 4Å: Chain A: R.19, M.36, F.38, R.40, P.73, K.75 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., AF9 YEATS Domain Links Histone Acetylation to DOT1L-Mediated H3K79 Methylation. Cell (2014)

Release Date

2014-11-05

Peptides

Protein AF-9: A
ALA-ARG-THR-LYS-GLN-THR-ALA-ARG-ALY-SER-THR: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Protein AF-9

ALA-ARG-THR-LYS-GLN-THR-ALA-ARG-ALY-SER-THR

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