SMTL ID : 3me9.3 (2 other biounits)

Crystal structure of SGF29 in complex with H3K4me3 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.37 Å

Oligo State

hetero-oligomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: M.7, Q.11, L.124, Y.125, P.126, Q.127, T.128 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.127, A:T.128, A:T.128 Water bridges: A:Y.125

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: S.93, R.95, R.96 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.93 Water bridges: A:S.93 Salt bridges: A:R.95, A:R.96

5 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 3 residues within 4Å: Chain A: D.47, K.48, R.169 No protein-ligand interaction detected (PLIP) UNX.4: 2 residues within 4Å: Chain A: Y.41, R.44 No protein-ligand interaction detected (PLIP) UNX.5: 3 residues within 4Å: Chain A: S.93, R.94, R.95 No protein-ligand interaction detected (PLIP) UNX.6: 1 residues within 4Å: Chain A: E.108 No protein-ligand interaction detected (PLIP) UNX.7: 3 residues within 4Å: Chain A: F.115, V.172, A.173 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bian, C. et al., Sgf29 binds histone H3K4me2/3 and is required for SAGA complex recruitment and histone H3 acetylation. Embo J. (2011)

Release Date

2010-04-28

Peptides

SAGA-associated factor 29 homolog: A
Histone H3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

SAGA-associated factor 29 homolog

Histone H3

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