- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.62 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x 4MT: N-[2-(4-hydroxyphenyl)ethyl]thioformamide(Covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 3 residues within 4Å:- Chain A: P.15, D.16
- Ligands: SO4.8
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:D.16, A:D.16
- Water bridges: A:G.17
SO4.3: 6 residues within 4Å:- Chain A: H.62, Y.99
- Chain B: H.62, Y.99
- Chain C: H.62, Y.99
5 PLIP interactions:1 interactions with chain B, 2 interactions with chain C, 2 interactions with chain A- Salt bridges: B:H.62, C:H.62, A:H.62
- Water bridges: C:Y.99, A:Y.99
SO4.4: 4 residues within 4Å:- Chain A: K.32, Y.36, F.113
- Ligands: 4MT.1
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:K.32
SO4.5: 1 residues within 4Å:- Chain A: R.73
4 PLIP interactions:3 interactions with chain B, 1 interactions with chain A- Water bridges: B:S.111, B:S.111, B:T.112
- Salt bridges: A:R.73
SO4.6: 4 residues within 4Å:- Chain A: G.68, G.69, A.70, Q.71
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:G.69, A:A.70, A:Q.71, A:Q.71
SO4.7: 2 residues within 4Å:- Chain A: A.70, R.73
3 PLIP interactions:3 interactions with chain A- Water bridges: A:A.70, A:R.73
- Salt bridges: A:R.73
SO4.8: 3 residues within 4Å:- Chain A: P.15, R.86
- Ligands: SO4.2
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.86
SO4.11: 4 residues within 4Å:- Chain B: G.68, G.69, A.70, Q.71
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:G.69, B:A.70, B:Q.71, B:Q.71
SO4.14: 5 residues within 4Å:- Chain C: D.16, G.17, F.18, L.19, S.20
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:D.16, C:G.17, C:G.17, C:F.18, C:L.19, C:S.20
SO4.15: 2 residues within 4Å:- Chain C: A.70, R.73
1 PLIP interactions:1 interactions with chain C- Salt bridges: C:R.73
SO4.16: 2 residues within 4Å:- Chain C: G.65, K.66
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:K.66
- Water bridges: C:I.67, C:D.100
SO4.17: 4 residues within 4Å:- Chain C: G.68, G.69, A.70, Q.71
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:G.69, C:A.70, C:Q.71, C:Q.71
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Spencer, E.S. et al., Multiple binding modes of isothiocyanates that inhibit macrophage migration inhibitory factor. Eur.J.Med.Chem. (2015)
- Release Date
- 2014-03-12
- Peptides
- Macrophage migration inhibitory factor: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.62 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x 4MT: N-[2-(4-hydroxyphenyl)ethyl]thioformamide(Covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Spencer, E.S. et al., Multiple binding modes of isothiocyanates that inhibit macrophage migration inhibitory factor. Eur.J.Med.Chem. (2015)
- Release Date
- 2014-03-12
- Peptides
- Macrophage migration inhibitory factor: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C