SMTL ID : 4pd4.1

Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 3.04 Å
Oligo State
hetero-2-2-2-2-2-2-2-2-2-2-2-mer
Ligands
2 x UMQ: UNDECYL-MALTOSIDE(Non-covalent)
6 x 3PH: 1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE(Non-covalent)
6 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
2 x AOQ: 2-[trans-4-(4-chlorophenyl)cyclohexyl]-3-hydroxynaphthalene-1,4-dione(Non-covalent)
2 x 3PE: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE(Non-covalent)
2 x UQ6: 5-(3,7,11,15,19,23-HEXAMETHYL-TETRACOSA-2,6,10,14,18,22-HEXAENYL)-2,3-DIMETHOXY-6-METHYL-BENZENE-1,4-DIOL(Non-covalent)
2 x FES: FE2/S2 (INORGANIC) CLUSTER(Covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Birth, D. et al., Structural analysis of atovaquone-inhibited cytochrome bc1 complex reveals the molecular basis of antimalarial drug action. Nat Commun (2014)
Release Date
2014-06-11
Peptides
Cytochrome b-c1 complex subunit 1, mitochondrial: AL
Cytochrome b-c1 complex subunit 2, mitochondrial: BM
Cytochrome b: CN
Cytochrome c1, heme protein, mitochondrial: DO
Cytochrome b-c1 complex subunit Rieske, mitochondrial: EP
Cytochrome b-c1 complex subunit 6: FQ
Cytochrome b-c1 complex subunit 7: GR
Cytochrome b-c1 complex subunit 8: HS
Cytochrome b-c1 complex subunit 9: IT
Igh protein: JU
Ig kappa chain V-V region HP 124E1: KV
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
L
A
B
B
M
B
C
C
N
C
D
D
O
D
E
E
P
E
F
F
Q
F
G
G
R
G
H
H
S
H
I
I
T
I
J
J
U
J
K
K
V
K
Membrane
We predict this structure to be a membrane protein.

Cytochrome b-c1 complex subunit 1, mitochondrial

Toggle Identical (AL)

Cytochrome b-c1 complex subunit 2, mitochondrial

Toggle Identical (BM)

Cytochrome b

Toggle Identical (CN)

Cytochrome c1, heme protein, mitochondrial

Toggle Identical (DO)

Cytochrome b-c1 complex subunit Rieske, mitochondrial

Toggle Identical (EP)

Cytochrome b-c1 complex subunit 6

Toggle Identical (FQ)

Cytochrome b-c1 complex subunit 7

Toggle Identical (GR)

Cytochrome b-c1 complex subunit 8

Toggle Identical (HS)

Cytochrome b-c1 complex subunit 9

Toggle Identical (IT)

Igh protein

Toggle Identical (JU)

Ig kappa chain V-V region HP 124E1

Toggle Identical (KV)

Related Entries With Identical Sequence

1ezv.1 | 1kb9.1 | 1kyo.1 | 1p84.1 | 1p84.2 | 2ibz.1 | 3cx5.1 | 3cxh.1 | 6giq.1 | 6hu9.1 | 6t0b.1 | 6t15.1 | 6ymx.1