SMTL ID : 4rup.1

Crystal structure of zVDR L337H mutant-Gemini72 complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-2-2-mer

Ligands

2 x H97: (1R,3R,7E,17beta)-17-[(1R)-6,6,6-trifluoro-5-hydroxy-1-(4-hydroxy-4-methylpentyl)-5-(trifluoromethyl)hex-3-yn-1-yl]-9,1 0-secoestra-5,7-diene-1,3-diol(Non-covalent)

H97.1: 25 residues within 4Å: Chain A: Y.24, L.104, L.107, L.110, V.111, S.114, I.145, M.149, R.151, S.152, S.155, W.163, C.165, V.177, A.180, H.182, H.186, L.187, H.272, Q.275, Y.276, L.279, L.289, V.293, F.297 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:L.107, A:L.110, A:L.110, A:V.111, A:I.145, A:W.163, A:V.177, A:H.182, A:L.187 Hydrogen bonds: A:Y.24, A:Y.24, A:S.114, A:R.151, A:S.155, A:H.182, A:H.272 Halogen bonds: A:A.180 H97.2: 25 residues within 4Å: Chain C: Y.24, L.104, L.107, L.110, V.111, S.114, I.145, M.149, R.151, S.152, S.155, W.163, C.165, V.177, A.180, H.182, H.186, L.187, H.272, Q.275, Y.276, L.279, L.289, V.293, F.297 15 PLIP interactions: 15 interactions with chain C Hydrophobic interactions: C:L.107, C:L.110, C:L.110, C:V.111, C:I.145, C:W.163, C:V.177, C:H.182, C:L.187 Hydrogen bonds: C:Y.24, C:S.114, C:R.151, C:S.155, C:H.272 Halogen bonds: C:A.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huet, T. et al., A vitamin D receptor selectively activated by gemini analogs reveals ligand dependent and independent effects. Cell Rep (2015)

Release Date

2015-10-07

Peptides

Vitamin D3 receptor A: AC
Nuclear receptor coactivator 1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
B

D
B

Vitamin D3 receptor A

Nuclear receptor coactivator 1

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