SMTL ID : 5b5m.1 (1 other biounit)

Crystal structure of the Sr-substituted LH1-RC complex from Tch. tepidum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

hetero-1-1-1-1-16-16-mer

Ligands

4 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 20 residues within 4Å: Chain A: Y.76, Q.77, N.78, V.79, Q.80, V.81, L.82, F.90, M.94, V.97, T.98, C.107, C.110, H.111, W.116, A.117, K.124, S.127, R.128 Ligands: HEM.2 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:Y.76, A:Y.76, A:F.90, A:M.94, A:V.97, A:W.116, A:W.116, A:W.116, A:K.124, A:R.128 Hydrogen bonds: A:Q.77, A:N.78, A:N.78, A:N.78, A:Q.80, A:V.81, A:L.82 Salt bridges: A:K.124, A:R.128 pi-Stacking: A:F.90 Metal complexes: A:H.111 HEM.2: 24 residues within 4Å: Chain A: V.97, V.101, Y.109, Y.122, T.123, V.126, S.127, M.130, L.133, V.134, C.152, C.155, H.156, P.160, V.161, P.162, I.279, L.291, R.295, L.303, R.304, V.305, C.310 Ligands: HEM.1 13 PLIP interactions: 13 interactions with chain A, Hydrophobic interactions: A:V.97, A:V.101, A:V.101, A:V.126, A:M.130, A:L.133, A:V.134, A:V.161, A:I.279, A:V.305 Salt bridges: A:R.295, A:R.295 Metal complexes: A:H.156 HEM.3: 23 residues within 4Å: Chain A: I.210, R.211, I.212, T.213, T.232, F.233, M.236, M.237, I.239, S.240, L.243, C.247, C.250, H.251, F.256, N.257, R.266, A.269, W.270, R.274 Chain B: L.174 Chain C: I.191, Y.317 19 PLIP interactions: 17 interactions with chain A, 2 interactions with chain C, Hydrophobic interactions: A:T.232, A:F.233, A:F.233, A:M.236, A:I.239, A:L.243, A:F.256, A:F.256, A:F.256, A:F.256, A:N.257, A:R.266, C:I.191, C:I.191 Hydrogen bonds: A:I.212, A:T.213, A:T.213 Salt bridges: A:R.274 Metal complexes: A:H.251 HEM.4: 24 residues within 4Å: Chain A: H.144, V.145, A.146, T.148, G.149, V.150, L.204, I.239, L.243, F.249, K.265, T.268, A.269, A.272, I.273, V.276, V.305, S.306, C.307, C.310, H.311, N.315, K.316, P.317 17 PLIP interactions: 17 interactions with chain A, Hydrophobic interactions: A:V.150, A:L.204, A:I.239, A:L.243, A:K.265, A:T.268, A:A.272, A:I.273, A:V.305, A:P.317 Hydrogen bonds: A:T.148, A:N.315 Salt bridges: A:K.265, A:K.316, A:K.316 pi-Cation interactions: A:H.144 Metal complexes: A:H.311

19 x SR: STRONTIUM ION(Non-functional Binders)

SR.5: 4 residues within 4Å: Chain A: N.42, Y.43 Chain B: Q.172, T.265 Ligand excluded by PLIP SR.12: 4 residues within 4Å: Chain B: P.61, Q.66 Chain E: S.41 Chain G: D.48 Ligand excluded by PLIP SR.13: 1 residues within 4Å: Chain B: W.281 Ligand excluded by PLIP SR.30: 5 residues within 4Å: Chain E: D.43, N.45, D.49 Chain G: Y.55, Q.56 Ligand excluded by PLIP SR.34: 6 residues within 4Å: Chain G: D.43, N.45, D.49 Chain H: R.44 Chain I: Y.55, Q.56 Ligand excluded by PLIP SR.37: 5 residues within 4Å: Chain I: D.43, N.45, D.49 Chain K: Y.55, Q.56 Ligand excluded by PLIP SR.41: 6 residues within 4Å: Chain K: D.43, N.45, D.49 Chain L: R.44 Chain M: Y.55, Q.56 Ligand excluded by PLIP SR.45: 5 residues within 4Å: Chain M: D.43, N.45, D.49 Chain O: Y.55, Q.56 Ligand excluded by PLIP SR.49: 5 residues within 4Å: Chain O: D.43, N.45, D.49 Chain Q: Y.55, Q.56 Ligand excluded by PLIP SR.53: 4 residues within 4Å: Chain Q: N.45, D.49 Chain S: Y.55, Q.56 Ligand excluded by PLIP SR.58: 5 residues within 4Å: Chain S: D.43, N.45, D.49 Chain U: Y.55, Q.56 Ligand excluded by PLIP SR.63: 5 residues within 4Å: Chain U: N.45, D.49 Chain V: R.44 Chain W: Y.55, Q.56 Ligand excluded by PLIP SR.66: 6 residues within 4Å: Chain W: D.43, N.45, D.49 Chain X: R.44 Chain Y: Y.55, Q.56 Ligand excluded by PLIP SR.70: 5 residues within 4Å: Chain 0: Y.55, Q.56 Chain Y: D.43, N.45, D.49 Ligand excluded by PLIP SR.75: 5 residues within 4Å: Chain 0: D.43, N.45, D.49 Chain 2: Y.55, Q.56 Ligand excluded by PLIP SR.82: 5 residues within 4Å: Chain 2: N.45, D.49 Chain 3: R.44 Chain 4: Y.55, Q.56 Ligand excluded by PLIP SR.83: 5 residues within 4Å: Chain 4: D.43, N.45, D.49 Chain 6: Y.55, Q.56 Ligand excluded by PLIP SR.86: 5 residues within 4Å: Chain 6: D.43, N.45, D.49 Chain 8: Y.55, Q.56 Ligand excluded by PLIP SR.89: 5 residues within 4Å: Chain 8: D.43, N.45, D.49 Chain E: Y.55, Q.56 Ligand excluded by PLIP

36 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)

BCL.6: 23 residues within 4Å: Chain B: F.106, A.133, I.134, A.136, Y.137, L.140, V.166, S.167, F.176, H.177, H.182, A.185, I.186, F.189, S.253, C.256, I.257 Chain C: Y.197, Y.210 Ligands: BPH.7, BCL.8, BCL.10, BCL.15 16 PLIP interactions: 15 interactions with chain B, 1 interactions with chain C, Hydrophobic interactions: B:F.106, B:F.106, B:F.106, B:F.106, B:A.133, B:I.134, B:A.136, B:V.166, B:F.176, B:F.176, B:F.176, B:A.185, B:I.186, B:F.189, C:Y.197 Hydrogen bonds: B:I.257 BCL.8: 14 residues within 4Å: Chain B: M.183, I.186, S.187, F.190, T.191 Chain C: F.156, L.160, I.179, H.182, T.186 Ligands: BCL.6, BCL.15, BPH.16, CRT.18 8 PLIP interactions: 4 interactions with chain B, 4 interactions with chain C, Hydrophobic interactions: B:I.186, B:I.186, C:F.156, C:L.160 Hydrogen bonds: B:T.191, B:T.191 pi-Stacking: C:H.182 Metal complexes: C:H.182 BCL.10: 15 residues within 4Å: Chain B: V.47, Y.137, L.140, F.155, I.159, L.160, H.162, L.163 Chain C: M.203, I.206, A.207, Y.210 Ligands: BCL.6, BPH.7, BCL.15 8 PLIP interactions: 6 interactions with chain B, 2 interactions with chain C, Hydrophobic interactions: B:V.47, B:Y.137, B:L.140, B:I.159, B:L.163, C:I.206 Metal complexes: B:H.162 pi-Stacking: C:Y.210 BCL.15: 28 residues within 4Å: Chain B: H.177, F.190 Chain C: L.122, I.126, A.153, F.156, Y.157, L.160, W.185, T.186, A.187, F.189, S.190, L.196, Y.197, H.202, S.205, I.206, L.209, Y.210, T.276, A.280, G.283, I.284 Ligands: BCL.6, BCL.8, BCL.10, BPH.16 17 PLIP interactions: 1 interactions with chain B, 16 interactions with chain C, Hydrophobic interactions: B:F.190, C:L.122, C:I.126, C:F.156, C:F.156, C:Y.157, C:W.185, C:T.186, C:A.187, C:F.189, C:L.196, C:I.206, C:I.206, C:L.209, C:Y.210, C:T.276 Salt bridges: C:H.202 BCL.28: 17 residues within 4Å: Chain E: Q.28, L.31, G.32, I.35, H.36, V.39, L.44 Chain F: W.29, F.30, V.33, H.37, A.40, W.41, W.46 Ligands: BCL.31, BCL.32, CRT.90 12 PLIP interactions: 3 interactions with chain E, 9 interactions with chain F, Hydrophobic interactions: E:L.31, E:L.44, F:F.30, F:V.33, F:A.40, F:W.41, F:W.46, F:W.46 Hydrogen bonds: E:Q.28 pi-Stacking: F:H.37, F:H.37 Metal complexes: F:H.37 BCL.31: 21 residues within 4Å: Chain 8: F.2, W.12, V.20, I.35 Chain 9: F.22, M.23, M.26, L.47 Chain E: V.25, Q.28, I.29, H.36, W.46 Chain F: W.29, L.32, V.33, A.36, H.37 Ligands: BCL.28, CRT.29, BCL.92 17 PLIP interactions: 6 interactions with chain E, 3 interactions with chain F, 5 interactions with chain 8, 3 interactions with chain 9, Hydrophobic interactions: E:V.25, E:I.29, E:W.46, F:W.29, F:A.36, 8:F.2, 8:F.2, 8:W.12, 8:V.20, 8:I.35, 9:F.22, 9:F.22, 9:L.47 pi-Stacking: E:H.36, E:H.36 Metal complexes: E:H.36 Hydrogen bonds: F:H.37 BCL.32: 23 residues within 4Å: Chain E: V.20, S.23, I.24, I.35 Chain G: V.22, V.25, Q.28, I.29, H.36, V.39, W.46 Chain H: W.29, L.32, V.33, A.36, H.37, A.40, R.44 Ligands: PEF.23, BCL.28, BCL.33, CRT.35, CRT.90 18 PLIP interactions: 11 interactions with chain G, 4 interactions with chain E, 3 interactions with chain H, Hydrophobic interactions: G:V.22, G:V.25, G:Q.28, G:I.29, G:V.39, G:W.46, G:W.46, G:W.46, G:W.46, E:V.20, E:V.20, E:I.24, E:I.35, H:W.29, H:W.29, H:A.40 pi-Stacking: G:H.36 Metal complexes: G:H.36 BCL.33: 16 residues within 4Å: Chain G: Q.28, L.31, G.32, I.35, H.36, V.39 Chain H: W.29, F.30, V.33, V.34, H.37, A.40, W.46 Ligands: BCL.32, CRT.35, BCL.36 9 PLIP interactions: 6 interactions with chain H, 3 interactions with chain G, Hydrophobic interactions: H:F.30, H:V.33, H:V.34, H:A.40, H:W.46, G:V.39 Metal complexes: H:H.37 Hydrogen bonds: G:Q.28, G:H.36 BCL.36: 17 residues within 4Å: Chain G: I.11, W.12, I.35 Chain I: V.25, Q.28, I.29, G.32, H.36, W.46 Chain J: W.29, L.32, V.33, A.36, H.37 Ligands: BCL.33, CRT.35, BCL.39 15 PLIP interactions: 6 interactions with chain J, 6 interactions with chain I, 3 interactions with chain G, Hydrophobic interactions: J:W.29, J:W.29, J:W.29, J:W.29, J:A.36, I:Q.28, I:W.46, I:W.46, I:W.46, I:W.46, G:I.11, G:W.12, G:I.35 Hydrogen bonds: J:H.37 pi-Stacking: I:H.36 BCL.39: 16 residues within 4Å: Chain I: Q.28, L.31, G.32, I.35, H.36 Chain J: W.29, F.30, V.33, H.37, A.40, W.41, W.46, L.47 Ligands: BCL.36, CRT.38, BCL.40 13 PLIP interactions: 10 interactions with chain J, 3 interactions with chain I, Hydrophobic interactions: J:F.30, J:V.33, J:V.33, J:A.40, J:W.41, J:W.46, J:W.46, J:W.46, J:L.47, I:L.31 Metal complexes: J:H.37 Hydrogen bonds: I:Q.28, I:H.36 BCL.40: 18 residues within 4Å: Chain I: S.23, I.24, F.27, I.35 Chain K: V.25, I.29, H.36, V.39, L.44, W.46 Chain L: W.29, L.32, V.33, A.36, H.37 Ligands: CRT.38, BCL.39, BCL.43 9 PLIP interactions: 2 interactions with chain I, 5 interactions with chain K, 2 interactions with chain L, Hydrophobic interactions: I:I.24, I:I.35, K:V.25, K:V.39, K:W.46, K:W.46, K:W.46, L:W.29 Hydrogen bonds: L:H.37 BCL.43: 18 residues within 4Å: Chain K: Q.28, L.31, G.32, I.35, H.36, V.39, L.44 Chain L: W.29, V.33, V.34, H.37, A.40, W.41, W.46 Chain M: L.47 Ligands: BCL.40, CRT.42, BCL.44 15 PLIP interactions: 3 interactions with chain K, 1 interactions with chain M, 11 interactions with chain L, Hydrophobic interactions: K:L.44, M:L.47, L:V.33, L:V.33, L:V.34, L:A.40, L:W.41, L:W.41, L:W.46, L:W.46, L:W.46, L:W.46 Hydrogen bonds: K:Q.28, K:H.36 Metal complexes: L:H.37 BCL.44: 17 residues within 4Å: Chain K: I.11, W.12, I.35 Chain L: M.23 Chain M: Q.28, I.29, H.36, V.39, W.46 Chain N: W.29, V.33, A.36, H.37 Ligands: CRT.42, BCL.43, CRT.46, BCL.47 12 PLIP interactions: 4 interactions with chain K, 3 interactions with chain N, 5 interactions with chain M, Hydrophobic interactions: K:I.11, K:I.11, K:W.12, K:I.35, N:W.29, N:W.29, M:V.39, M:W.46, M:W.46, M:W.46 Hydrogen bonds: N:H.37 Metal complexes: M:H.36 BCL.47: 15 residues within 4Å: Chain M: Q.28, L.31, G.32, I.35, H.36 Chain N: F.30, V.33, V.34, H.37, L.38, W.46, L.47 Ligands: BCL.44, CRT.46, BCL.50 12 PLIP interactions: 10 interactions with chain N, 2 interactions with chain M, Hydrophobic interactions: N:F.30, N:V.33, N:V.33, N:V.34, N:L.38, N:W.46, N:W.46, N:W.46, N:L.47 Metal complexes: N:H.37 Hydrogen bonds: M:Q.28, M:H.36 BCL.48: 13 residues within 4Å: Chain O: Q.28, L.31, G.32, I.35, H.36 Chain P: V.33, H.37, L.38, W.41, W.46 Ligands: BCL.50, CRT.51, BCL.52 7 PLIP interactions: 6 interactions with chain P, 1 interactions with chain O, Hydrophobic interactions: P:V.33, P:V.33, P:L.38, P:W.41, P:W.41, P:W.46 Hydrogen bonds: O:Q.28 BCL.50: 14 residues within 4Å: Chain M: I.35 Chain N: M.26 Chain O: Q.28, I.29, H.36, V.39, W.46 Chain P: W.29, V.33, A.36, H.37 Ligands: CRT.46, BCL.47, BCL.48 10 PLIP interactions: 5 interactions with chain O, 5 interactions with chain P, Hydrophobic interactions: O:Q.28, O:V.39, O:W.46, O:W.46, P:W.29, P:W.29, P:W.29, P:A.36 Metal complexes: O:H.36 Hydrogen bonds: P:H.37 BCL.52: 15 residues within 4Å: Chain O: I.35 Chain Q: Q.28, I.29, H.36, V.39, W.46 Chain R: W.29, L.32, V.33, A.36, H.37 Ligands: BCL.48, CRT.51, CRT.54, BCL.55 15 PLIP interactions: 7 interactions with chain Q, 7 interactions with chain R, 1 interactions with chain O, Hydrophobic interactions: Q:I.29, Q:V.39, Q:W.46, Q:W.46, Q:W.46, R:W.29, R:W.29, R:W.29, R:W.29, R:W.29, R:L.32, R:A.36, O:I.35 pi-Stacking: Q:H.36 Metal complexes: Q:H.36 BCL.55: 15 residues within 4Å: Chain Q: Q.28, L.31, G.32, I.35, H.36 Chain R: F.30, V.33, H.37, A.40, W.41, W.46, L.47 Ligands: BCL.52, CRT.54, BCL.57 11 PLIP interactions: 9 interactions with chain R, 2 interactions with chain Q, Hydrophobic interactions: R:V.33, R:V.33, R:H.37, R:A.40, R:W.46, R:W.46, R:W.46, R:W.46 Metal complexes: R:H.37 Hydrogen bonds: Q:Q.28, Q:H.36 BCL.57: 18 residues within 4Å: Chain Q: L.15, R.19, V.20, S.23, I.35 Chain S: V.22, V.25, Q.28, I.29, H.36, V.39, W.46 Chain T: W.29, A.36, H.37 Ligands: CRT.54, BCL.55, BCL.60 17 PLIP interactions: 2 interactions with chain T, 5 interactions with chain Q, 10 interactions with chain S, Hydrophobic interactions: T:W.29, Q:L.15, Q:R.19, Q:V.20, Q:V.20, Q:I.35, S:V.22, S:V.25, S:V.25, S:Q.28, S:I.29, S:V.39, S:W.46, S:W.46, S:W.46 Hydrogen bonds: T:H.37 Metal complexes: S:H.36 BCL.60: 16 residues within 4Å: Chain S: Q.28, L.31, G.32, I.35, H.36 Chain T: W.29, F.30, V.33, H.37, A.40, W.41, W.46, L.47 Ligands: BCL.57, CRT.59, BCL.61 12 PLIP interactions: 9 interactions with chain T, 3 interactions with chain S, Hydrophobic interactions: T:A.40, T:W.41, T:W.41, T:W.46, T:W.46, T:W.46, T:W.46, T:L.47, S:I.35 Metal complexes: T:H.37 Hydrogen bonds: S:Q.28, S:H.36 BCL.61: 18 residues within 4Å: Chain S: L.15, I.35 Chain U: V.25, Q.28, I.29, H.36, V.39, W.46 Chain V: W.29, L.32, V.33, A.36, H.37, A.40 Ligands: CRT.59, BCL.60, CRT.62, BCL.64 17 PLIP interactions: 6 interactions with chain V, 9 interactions with chain U, 2 interactions with chain S, Hydrophobic interactions: V:W.29, V:W.29, V:W.29, V:A.36, V:A.40, U:V.25, U:V.25, U:Q.28, U:I.29, U:V.39, U:W.46, U:W.46, U:W.46, S:L.15, S:I.35 Hydrogen bonds: V:H.37 Metal complexes: U:H.36 BCL.64: 18 residues within 4Å: Chain U: Q.28, L.31, G.32, I.35, H.36, V.39, L.44 Chain V: F.30, V.33, H.37, L.38, A.40, W.41, W.46, L.47 Ligands: BCL.61, CRT.62, BCL.65 19 PLIP interactions: 14 interactions with chain V, 5 interactions with chain U, Hydrophobic interactions: V:F.30, V:F.30, V:V.33, V:L.38, V:A.40, V:W.41, V:W.41, V:W.46, V:W.46, V:W.46, V:W.46, V:L.47, U:L.31, U:I.35, U:V.39, U:L.44 pi-Stacking: V:H.37 Metal complexes: V:H.37 Hydrogen bonds: U:Q.28 BCL.65: 15 residues within 4Å: Chain U: I.11, I.24, I.35 Chain W: V.25, Q.28, H.36, V.39, W.46 Chain X: W.29, L.32, A.36, H.37 Ligands: CRT.62, BCL.64, BCL.68 12 PLIP interactions: 2 interactions with chain U, 4 interactions with chain X, 6 interactions with chain W, Hydrophobic interactions: U:I.11, U:I.35, X:W.29, X:W.29, X:A.36, W:V.25, W:V.25, W:V.39, W:W.46, W:W.46 Hydrogen bonds: X:H.37 Metal complexes: W:H.36 BCL.68: 14 residues within 4Å: Chain W: Q.28, L.31, G.32, I.35, H.36 Chain X: W.29, F.30, V.33, H.37, W.46, L.47 Ligands: BCL.65, CRT.67, BCL.69 12 PLIP interactions: 9 interactions with chain X, 3 interactions with chain W, Hydrophobic interactions: X:F.30, X:V.33, X:V.33, X:H.37, X:W.46, X:W.46, X:W.46, W:L.31 pi-Stacking: X:H.37 Metal complexes: X:H.37 Hydrogen bonds: W:Q.28, W:H.36 BCL.69: 17 residues within 4Å: Chain W: I.35 Chain X: F.22 Chain Y: V.25, Q.28, I.29, H.36, V.39, W.46 Chain Z: W.29, L.32, V.33, A.36, H.37, A.40 Ligands: CRT.67, BCL.68, BCL.72 17 PLIP interactions: 1 interactions with chain W, 11 interactions with chain Y, 4 interactions with chain Z, 1 interactions with chain X, Hydrophobic interactions: W:I.35, Y:V.25, Y:V.25, Y:Q.28, Y:I.29, Y:V.39, Y:W.46, Y:W.46, Y:W.46, Y:W.46, Y:W.46, Z:W.29, Z:A.36, Z:A.40, X:F.22 Metal complexes: Y:H.36 Hydrogen bonds: Z:H.37 BCL.72: 17 residues within 4Å: Chain Y: Q.28, L.31, G.32, I.35, H.36, V.39, L.44 Chain Z: W.29, F.30, V.33, H.37, W.41, W.46, L.47 Ligands: BCL.69, CRT.71, BCL.73 10 PLIP interactions: 5 interactions with chain Z, 5 interactions with chain Y, Hydrophobic interactions: Z:F.30, Z:V.33, Z:W.46, Z:L.47, Y:L.31, Y:I.35, Y:V.39, Y:L.44 Metal complexes: Z:H.37 Hydrogen bonds: Y:Q.28 BCL.73: 16 residues within 4Å: Chain 0: I.29, H.36, V.39, W.46 Chain 1: W.29, L.32, V.33, A.36, H.37, A.40 Chain Y: S.23, I.24, I.35 Ligands: CRT.71, BCL.72, BCL.74 10 PLIP interactions: 6 interactions with chain 0, 2 interactions with chain 1, 2 interactions with chain Y, Hydrophobic interactions: 0:I.29, 0:I.29, 0:V.39, 0:W.46, 0:W.46, 1:A.40, Y:I.24, Y:I.35 Metal complexes: 0:H.36 Hydrogen bonds: 1:H.37 BCL.74: 16 residues within 4Å: Chain 0: Q.28, L.31, G.32, I.35, H.36, L.44 Chain 1: W.29, F.30, V.33, V.34, H.37, W.41, W.46 Ligands: BCL.73, CRT.76, BCL.77 12 PLIP interactions: 3 interactions with chain 0, 9 interactions with chain 1, Hydrophobic interactions: 0:L.31, 0:L.44, 1:F.30, 1:F.30, 1:V.33, 1:V.34, 1:H.37, 1:W.46, 1:W.46, 1:W.46 Hydrogen bonds: 0:Q.28 Metal complexes: 1:H.37 BCL.77: 15 residues within 4Å: Chain 0: I.24, F.27, I.35 Chain 2: V.25, I.29, H.36, V.39, W.46 Chain 3: W.29, L.32, A.36, H.37 Ligands: BCL.74, CRT.76, BCL.79 13 PLIP interactions: 3 interactions with chain 3, 7 interactions with chain 2, 3 interactions with chain 0, Hydrophobic interactions: 3:W.29, 3:A.36, 2:V.25, 2:V.39, 2:W.46, 2:W.46, 2:W.46, 2:W.46, 0:I.24, 0:F.27, 0:F.27 Hydrogen bonds: 3:H.37 Metal complexes: 2:H.36 BCL.79: 14 residues within 4Å: Chain 2: Q.28, L.31, G.32, I.35, H.36 Chain 3: W.29, F.30, V.33, H.37, W.41, W.46 Ligands: BCL.77, CRT.78, BCL.80 14 PLIP interactions: 10 interactions with chain 3, 4 interactions with chain 2, Hydrophobic interactions: 3:F.30, 3:V.33, 3:H.37, 3:W.41, 3:W.41, 3:W.46, 3:W.46, 3:W.46, 3:W.46, 2:I.35, 2:I.35 Metal complexes: 3:H.37 Hydrogen bonds: 2:Q.28, 2:H.36 BCL.80: 16 residues within 4Å: Chain 2: W.12, I.35 Chain 3: H.19, F.22 Chain 4: Q.28, I.29, H.36, W.46 Chain 5: W.29, L.32, V.33, A.36, H.37 Ligands: CRT.78, BCL.79, BCL.81 10 PLIP interactions: 3 interactions with chain 5, 1 interactions with chain 3, 5 interactions with chain 4, 1 interactions with chain 2, Hydrophobic interactions: 5:W.29, 5:W.29, 3:F.22, 4:W.46, 4:W.46, 4:W.46, 4:W.46, 2:W.12 Hydrogen bonds: 5:H.37 Metal complexes: 4:H.36 BCL.81: 17 residues within 4Å: Chain 4: Q.28, L.31, G.32, I.35, H.36, V.39 Chain 5: W.29, F.30, V.33, V.34, H.37, A.40, W.41, W.46 Chain 6: L.47 Ligands: BCL.80, BCL.85 12 PLIP interactions: 7 interactions with chain 5, 4 interactions with chain 4, 1 interactions with chain 6, Hydrophobic interactions: 5:F.30, 5:F.30, 5:V.34, 5:A.40, 5:W.41, 5:W.46, 4:I.35, 4:I.35, 4:V.39, 6:L.47 Metal complexes: 5:H.37 Hydrogen bonds: 4:H.36 BCL.85: 15 residues within 4Å: Chain 4: I.24, I.35 Chain 5: F.22 Chain 6: H.36, V.39, W.46 Chain 7: W.29, V.33, A.36, H.37, A.40 Ligands: BCL.81, CRT.84, CRT.87, BCL.88 13 PLIP interactions: 7 interactions with chain 6, 5 interactions with chain 7, 1 interactions with chain 4, Hydrophobic interactions: 6:V.39, 6:W.46, 6:W.46, 6:W.46, 6:W.46, 7:W.29, 7:W.29, 7:A.36, 7:A.40, 4:I.35 pi-Stacking: 6:H.36 Metal complexes: 6:H.36 Hydrogen bonds: 7:H.37 BCL.88: 15 residues within 4Å: Chain 6: Q.28, L.31, G.32, I.35, H.36, V.39 Chain 7: W.29, F.30, V.33, V.34, H.37, W.46 Ligands: BCL.85, CRT.87, BCL.91 13 PLIP interactions: 9 interactions with chain 7, 4 interactions with chain 6, Hydrophobic interactions: 7:F.30, 7:F.30, 7:V.33, 7:V.34, 7:H.37, 7:W.46, 7:W.46, 6:I.35, 6:V.39 pi-Stacking: 7:H.37, 7:H.37 Hydrogen bonds: 6:Q.28, 6:H.36 BCL.91: 14 residues within 4Å: Chain 6: L.15, I.24, I.35 Chain 8: Q.28, I.29, H.36, V.39, W.46 Chain 9: W.29, V.33, A.36 Ligands: CRT.87, BCL.88, BCL.92 15 PLIP interactions: 10 interactions with chain 8, 3 interactions with chain 6, 2 interactions with chain 9, Hydrophobic interactions: 8:Q.28, 8:I.29, 8:I.29, 8:V.39, 8:W.46, 8:W.46, 8:W.46, 8:W.46, 8:W.46, 6:L.15, 6:I.24, 6:I.35, 9:W.29, 9:W.29 Metal complexes: 8:H.36 BCL.92: 17 residues within 4Å: Chain 8: Q.28, L.31, G.32, I.35, H.36, V.39 Chain 9: F.30, V.33, V.34, H.37, W.41, W.46, L.47 Chain E: L.47 Ligands: CRT.29, BCL.31, BCL.91 10 PLIP interactions: 5 interactions with chain 9, 4 interactions with chain 8, 1 interactions with chain E, Hydrophobic interactions: 9:V.33, 9:W.41, 9:W.46, 9:W.46, 8:I.35, 8:V.39, E:L.47 Metal complexes: 9:H.37 Hydrogen bonds: 8:Q.28, 8:H.36

2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)

BPH.7: 27 residues within 4Å: Chain B: T.43, G.46, I.98, C.101, A.102, A.105, F.106, W.109, E.113, V.126, A.129, F.130, F.132, A.133, Y.137, Y.157, H.162, A.246, A.250 Chain C: Y.210, A.213, L.214, M.218, W.252 Ligands: BCL.6, BCL.10, MQ8.17 18 PLIP interactions: 15 interactions with chain B, 3 interactions with chain C Hydrophobic interactions: B:T.43, B:F.106, B:A.129, B:F.130, B:F.130, B:F.130, B:F.132, B:A.133, B:Y.137, B:Y.157, B:Y.157, B:Y.157, B:Y.157, B:A.250, C:Y.210, C:A.213, C:L.214 Hydrogen bonds: B:E.113 BPH.16: 22 residues within 4Å: Chain B: F.190, C.193, L.194, S.197, M.198 Chain C: S.60, I.61, G.64, L.65, S.125, I.126, W.129, T.133, L.146, A.149, F.150, A.153, A.273, V.277 Chain S: A.26 Ligands: BCL.8, BCL.15 9 PLIP interactions: 8 interactions with chain C, 1 interactions with chain S Hydrophobic interactions: C:I.61, C:W.129, C:A.149, C:F.150, C:F.150, C:F.150, C:A.273, C:V.277, S:A.26

1 x UQ8: Ubiquinone-8(Non-covalent)

UQ8.9: 20 residues within 4Å: Chain B: F.132, T.191, M.198, H.199, L.202, E.221, N.222, F.225, Y.231, S.232, I.233, G.234, A.235, I.238, L.241, F.244, S.248, F.251, W.252 Chain D: E.176 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:F.132, B:T.191, B:M.198, B:L.202, B:F.225, B:F.225, B:Y.231, B:I.233, B:I.238, B:I.238, B:L.241, B:F.244, B:F.244, B:F.244, B:F.251 Hydrogen bonds: B:I.233, B:G.234

8 x PEF: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE(Non-covalent)

PEF.11: 3 residues within 4Å: Chain B: L.17, R.118, F.124 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.118 PEF.20: 13 residues within 4Å: Chain B: F.30 Chain C: R.253, M.256, G.257, F.258 Chain D: R.31, K.35, Y.39, V.56, G.57, F.58 Ligands: MQ8.17, PEF.27 8 PLIP interactions: 1 interactions with chain B, 5 interactions with chain D, 2 interactions with chain C Hydrophobic interactions: B:F.30 Hydrogen bonds: D:R.31, D:Y.39, D:F.58, C:R.253, C:R.253 Salt bridges: D:R.31, D:K.35 PEF.21: 6 residues within 4Å: Chain C: Y.4, Q.5, N.6, I.7, F.8 Ligands: PEF.22 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:Q.5, C:N.6, C:I.7, C:F.8 PEF.22: 7 residues within 4Å: Chain C: F.8, A.10, Y.38, W.39, K.42 Chain D: K.204 Ligands: PEF.21 5 PLIP interactions: 1 interactions with chain D, 4 interactions with chain C Salt bridges: D:K.204, C:K.42, C:K.42, C:K.42 Hydrophobic interactions: C:F.8 PEF.23: 16 residues within 4Å: Chain D: R.45, V.53, V.55, V.56, G.57 Chain E: I.14, L.15, D.16, R.19, V.20 Chain G: R.18, R.19, V.22 Ligands: PEF.25, PEF.27, BCL.32 11 PLIP interactions: 5 interactions with chain D, 2 interactions with chain G, 4 interactions with chain E Hydrophobic interactions: D:V.53, G:R.18, E:L.15, E:R.19, E:V.20 Hydrogen bonds: D:V.56, D:G.57 Salt bridges: D:R.45, D:R.45, G:R.18, E:R.19 PEF.25: 9 residues within 4Å: Chain D: S.49, G.50, G.51, R.52, V.53, K.54 Chain G: D.16 Chain H: G.9 Ligands: PEF.23 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:R.52, D:K.54 Salt bridges: D:K.54 PEF.26: 7 residues within 4Å: Chain B: N.208 Chain C: S.143, H.145, R.267, W.271 Chain D: Y.29, E.33 8 PLIP interactions: 2 interactions with chain B, 5 interactions with chain C, 1 interactions with chain D Hydrogen bonds: B:N.208, B:P.209, C:S.143 Hydrophobic interactions: C:R.267, D:Y.29 Salt bridges: C:H.145, C:R.267, C:R.267 PEF.27: 8 residues within 4Å: Chain B: A.2, G.28 Chain D: S.43, V.55 Chain E: R.18, R.19 Ligands: PEF.20, PEF.23 6 PLIP interactions: 3 interactions with chain B, 3 interactions with chain E Hydrogen bonds: B:A.2, B:A.2, B:G.28 Salt bridges: E:R.18, E:R.19, E:R.19

1 x FE: FE (III) ION(Non-covalent)

FE.14: 5 residues within 4Å: Chain B: H.199, H.239 Chain C: H.219, E.234, H.266 5 PLIP interactions: 3 interactions with chain C, 2 interactions with chain B Metal complexes: C:H.219, C:E.234, C:H.266, B:H.199, B:H.239

1 x MQ8: MENAQUINONE 8(Non-covalent)

MQ8.17: 22 residues within 4Å: Chain 8: F.27 Chain B: F.40, W.109 Chain C: L.214, L.215, M.218, H.219, T.222, A.245, A.248, A.249, W.252, M.256, F.258, N.259, V.260, T.261, M.262, I.265 Chain E: I.29 Ligands: BPH.7, PEF.20 16 PLIP interactions: 11 interactions with chain C, 3 interactions with chain B, 1 interactions with chain E, 1 interactions with chain 8 Hydrophobic interactions: C:L.214, C:L.215, C:H.219, C:T.222, C:A.248, C:A.249, C:W.252, C:M.256, C:F.258, C:I.265, B:F.40, B:W.109, B:W.109, E:I.29, 8:F.27 Hydrogen bonds: C:V.260

17 x CRT: SPIRILLOXANTHIN(Non-covalent)

CRT.18: 19 residues within 4Å: Chain C: I.68, I.71, G.72, F.90, W.115, G.119, L.120, T.123, Y.157, G.161, F.162, V.175, F.177, G.178, H.182 Chain O: L.34, I.38, S.41 Ligands: BCL.8 16 PLIP interactions: 15 interactions with chain C, 1 interactions with chain O Hydrophobic interactions: C:I.71, C:F.90, C:W.115, C:L.120, C:L.120, C:T.123, C:Y.157, C:F.162, C:F.162, C:F.162, C:V.175, C:F.177, C:F.177, C:F.177, C:H.182, O:L.34 CRT.29: 20 residues within 4Å: Chain 6: L.8, I.14 Chain 8: I.24, F.27, Q.28, L.31, L.34, I.35 Chain 9: E.14, E.17, F.18, I.21, F.22, S.25, M.26 Chain E: L.33, H.36, M.37 Ligands: BCL.31, BCL.92 13 PLIP interactions: 5 interactions with chain 8, 5 interactions with chain 9, 2 interactions with chain 6, 1 interactions with chain E Hydrophobic interactions: 8:I.24, 8:F.27, 8:L.31, 8:L.34, 8:I.35, 9:E.17, 9:I.21, 9:I.21, 9:I.21, 9:M.26, 6:L.8, 6:I.14, E:H.36 CRT.35: 28 residues within 4Å: Chain E: K.10, I.11, L.13, I.14 Chain G: L.21, I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain H: E.14, E.17, F.18, I.21, F.22, S.25, M.26, W.29 Chain I: G.32, L.33, H.36, M.37, L.40 Ligands: BCL.32, BCL.33, BCL.36 22 PLIP interactions: 9 interactions with chain H, 3 interactions with chain I, 2 interactions with chain E, 8 interactions with chain G Hydrophobic interactions: H:E.14, H:E.17, H:F.18, H:F.18, H:F.18, H:I.21, H:I.21, H:M.26, H:W.29, I:L.33, I:H.36, I:L.40, E:K.10, E:I.14, G:L.21, G:I.24, G:F.27, G:F.27, G:L.31, G:L.34, G:I.35, G:I.38 CRT.38: 22 residues within 4Å: Chain G: I.14 Chain I: L.21, I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain J: E.14, E.17, F.18, I.21, F.22, S.25, M.26 Chain K: I.29, L.33, H.36, M.37 Ligands: BCL.39, BCL.40 20 PLIP interactions: 8 interactions with chain I, 10 interactions with chain J, 1 interactions with chain K, 1 interactions with chain G Hydrophobic interactions: I:L.21, I:I.24, I:F.27, I:F.27, I:L.31, I:L.31, I:L.34, I:I.35, J:E.14, J:F.18, J:F.18, J:I.21, J:I.21, J:I.21, J:F.22, J:F.22, J:F.22, J:M.26, K:I.29, G:I.14 CRT.42: 23 residues within 4Å: Chain I: N.7, K.10, I.11, L.13, I.14 Chain K: L.21, I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain L: E.17, F.18, I.21, F.22, M.26 Chain M: I.29, L.33, H.36 Ligands: BCL.43, BCL.44 18 PLIP interactions: 10 interactions with chain K, 7 interactions with chain L, 1 interactions with chain I Hydrophobic interactions: K:L.21, K:L.21, K:I.24, K:I.24, K:F.27, K:Q.28, K:L.31, K:L.34, K:I.35, K:I.38, L:E.17, L:F.18, L:F.18, L:I.21, L:F.22, L:F.22, L:M.26, I:I.14 CRT.46: 25 residues within 4Å: Chain K: K.10, I.11, L.13, I.14 Chain M: L.21, I.24, F.27, Q.28, L.31, L.34, I.35 Chain N: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30 Chain O: I.29, L.33, H.36 Ligands: BCL.44, BCL.47, BCL.50 18 PLIP interactions: 2 interactions with chain O, 7 interactions with chain M, 2 interactions with chain K, 7 interactions with chain N Hydrophobic interactions: O:I.29, O:H.36, M:L.21, M:I.24, M:F.27, M:F.27, M:L.31, M:L.34, M:I.35, K:K.10, K:I.14, N:E.14, N:F.18, N:F.18, N:I.21, N:I.21, N:M.26, N:F.30 CRT.51: 22 residues within 4Å: Chain M: I.14 Chain O: L.21, I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain P: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30 Chain Q: L.33, H.36, M.37 Ligands: BCL.48, BCL.52 19 PLIP interactions: 10 interactions with chain P, 1 interactions with chain M, 8 interactions with chain O Hydrophobic interactions: P:F.18, P:I.21, P:I.21, P:I.21, P:F.22, P:F.22, P:F.22, P:M.26, P:F.30, P:F.30, M:I.14, O:L.21, O:L.21, O:I.24, O:F.27, O:L.31, O:L.31, O:L.34, O:I.35 CRT.54: 23 residues within 4Å: Chain O: K.10, I.11, I.14 Chain Q: L.21, I.24, F.27, Q.28, L.31, L.34, I.35 Chain R: E.14, E.17, F.18, I.21, F.22, S.25, M.26 Chain S: I.29, L.33, H.36 Ligands: BCL.52, BCL.55, BCL.57 19 PLIP interactions: 9 interactions with chain Q, 7 interactions with chain R, 2 interactions with chain O, 1 interactions with chain S Hydrophobic interactions: Q:L.21, Q:I.24, Q:I.24, Q:F.27, Q:F.27, Q:L.31, Q:L.31, Q:L.34, Q:I.35, R:F.18, R:F.18, R:F.18, R:I.21, R:I.21, R:F.22, R:M.26, O:K.10, O:I.11, S:H.36 CRT.59: 27 residues within 4Å: Chain Q: L.8, K.10, I.11, I.14 Chain S: L.21, I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain T: L.10, E.14, E.17, F.18, I.21, F.22, S.25, M.26, W.29, F.30 Chain U: L.33, H.36, M.37 Ligands: BCL.60, BCL.61 17 PLIP interactions: 7 interactions with chain T, 8 interactions with chain S, 2 interactions with chain Q Hydrophobic interactions: T:E.14, T:F.18, T:I.21, T:I.21, T:M.26, T:W.29, T:F.30, S:L.21, S:I.24, S:F.27, S:L.31, S:L.31, S:L.34, S:I.35, S:I.38, Q:K.10, Q:I.14 CRT.62: 26 residues within 4Å: Chain C: F.84 Chain S: N.7, L.8, K.10, I.11, I.14 Chain U: L.21, I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain V: E.14, E.17, F.18, I.21, F.22, S.25, M.26 Chain W: L.33, H.36 Ligands: BCL.61, BCL.64, BCL.65 16 PLIP interactions: 7 interactions with chain U, 5 interactions with chain V, 3 interactions with chain S, 1 interactions with chain W Hydrophobic interactions: U:L.21, U:I.24, U:F.27, U:F.27, U:L.31, U:L.34, U:I.35, V:F.18, V:I.21, V:I.21, V:F.22, V:M.26, S:L.8, S:I.11, S:I.14, W:H.36 CRT.67: 26 residues within 4Å: Chain U: K.10, I.11, I.14 Chain W: L.21, I.24, F.27, Q.28, L.31, I.35, I.38 Chain X: L.10, E.14, A.15, E.17, F.18, I.21, F.22, S.25, M.26, F.30 Chain Y: I.29, L.33, H.36, M.37 Ligands: BCL.68, BCL.69 25 PLIP interactions: 13 interactions with chain X, 8 interactions with chain W, 3 interactions with chain Y, 1 interactions with chain U Hydrophobic interactions: X:E.14, X:A.15, X:E.17, X:E.17, X:F.18, X:F.18, X:F.18, X:I.21, X:I.21, X:I.21, X:F.22, X:M.26, X:F.30, W:L.21, W:I.24, W:F.27, W:F.27, W:L.31, W:L.31, W:I.35, W:I.38, Y:I.29, Y:L.33, Y:H.36, U:I.14 CRT.71: 26 residues within 4Å: Chain 0: L.33, H.36, M.37 Chain W: N.7, K.10, I.11, I.14 Chain Y: L.21, I.24, Q.28, L.31, L.34, I.35, I.38 Chain Z: L.10, E.14, E.17, F.18, I.21, F.22, S.25, M.26, W.29, F.30 Ligands: BCL.72, BCL.73 18 PLIP interactions: 10 interactions with chain Z, 2 interactions with chain W, 1 interactions with chain 0, 5 interactions with chain Y Hydrophobic interactions: Z:E.17, Z:F.18, Z:F.18, Z:F.18, Z:I.21, Z:I.21, Z:F.22, Z:M.26, Z:W.29, Z:F.30, W:I.11, W:I.14, 0:H.36, Y:L.21, Y:I.24, Y:L.34, Y:I.35, Y:I.38 CRT.76: 25 residues within 4Å: Chain 0: L.21, I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain 1: E.14, F.18, I.21, F.22, S.25, M.26, W.29 Chain 2: I.29, L.33, H.36, M.37 Chain Y: L.8, K.10, I.11, I.14 Ligands: BCL.74, BCL.77 23 PLIP interactions: 5 interactions with chain Y, 11 interactions with chain 1, 6 interactions with chain 0, 1 interactions with chain 2 Hydrophobic interactions: Y:L.8, Y:K.10, Y:I.11, Y:I.11, Y:I.14, 1:E.14, 1:F.18, 1:F.18, 1:F.18, 1:I.21, 1:I.21, 1:F.22, 1:F.22, 1:F.22, 1:M.26, 1:W.29, 0:L.21, 0:I.24, 0:F.27, 0:L.34, 0:I.35, 0:I.38, 2:I.29 CRT.78: 21 residues within 4Å: Chain 0: K.10, I.11, I.14 Chain 2: L.21, I.24, Q.28, L.31, L.34, I.38 Chain 3: E.14, E.17, F.18, I.21, F.22, S.25, M.26, W.29 Chain 4: L.33, H.36 Ligands: BCL.79, BCL.80 19 PLIP interactions: 6 interactions with chain 2, 10 interactions with chain 3, 3 interactions with chain 0 Hydrophobic interactions: 2:L.21, 2:I.24, 2:L.31, 2:L.31, 2:L.34, 2:I.38, 3:E.14, 3:F.18, 3:F.18, 3:I.21, 3:I.21, 3:F.22, 3:F.22, 3:F.22, 3:M.26, 3:W.29, 0:K.10, 0:I.11, 0:I.14 CRT.84: 24 residues within 4Å: Chain 2: N.7, L.8, K.10, I.11, L.13, I.14 Chain 4: I.24, F.27, Q.28, L.31, L.34, I.35, I.38 Chain 5: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30 Chain 6: L.33, H.36 Ligands: BCL.85 14 PLIP interactions: 5 interactions with chain 5, 7 interactions with chain 4, 2 interactions with chain 2 Hydrophobic interactions: 5:E.14, 5:I.21, 5:I.21, 5:M.26, 5:F.30, 4:I.24, 4:I.24, 4:F.27, 4:F.27, 4:L.31, 4:L.34, 4:I.35, 2:L.8, 2:I.14 CRT.87: 24 residues within 4Å: Chain 4: L.8, K.10, I.11, I.14 Chain 6: L.21, I.24, F.27, L.31, L.34, I.35, I.38 Chain 7: E.17, F.18, I.21, F.22, S.25, M.26, W.29, F.30 Chain 8: L.33, H.36 Ligands: BCL.85, BCL.88, BCL.91 19 PLIP interactions: 8 interactions with chain 6, 9 interactions with chain 7, 2 interactions with chain 4 Hydrophobic interactions: 6:L.21, 6:L.21, 6:I.24, 6:F.27, 6:F.27, 6:L.31, 6:L.34, 6:I.35, 7:E.17, 7:F.18, 7:F.18, 7:I.21, 7:I.21, 7:F.22, 7:M.26, 7:W.29, 7:F.30, 4:K.10, 4:I.11 CRT.90: 25 residues within 4Å: Chain 8: F.2, T.3, K.10, I.11, I.14 Chain E: L.21, I.24, Q.28, L.31, L.34, I.35, I.38 Chain F: L.10, E.14, E.17, F.18, I.21, F.22, S.25, M.26 Chain G: L.33, H.36, M.37 Ligands: BCL.28, BCL.32 18 PLIP interactions: 7 interactions with chain E, 4 interactions with chain 8, 7 interactions with chain F Hydrophobic interactions: E:L.21, E:L.21, E:I.24, E:L.31, E:L.31, E:L.34, E:I.35, 8:T.3, 8:K.10, 8:I.11, 8:I.14, F:F.18, F:F.18, F:F.18, F:I.21, F:I.21, F:F.22, F:M.26

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.19: 9 residues within 4Å: Chain C: G.26, L.28, Y.52, G.54, L.55, T.56, K.135, R.136 Chain O: R.19 7 PLIP interactions: 6 interactions with chain C, 1 interactions with chain O Hydrogen bonds: C:Y.52, C:L.55, C:T.56, C:T.56, C:R.136 Salt bridges: C:K.135, O:R.19 PO4.24: 4 residues within 4Å: Chain C: H.301 Chain D: Y.8, Q.13, W.17 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:Q.13

1 x PGW: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate(Non-covalent)

PGW.56: 6 residues within 4Å: Chain C: I.31, G.32, R.33, I.35 Chain S: R.18, R.19 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain S Hydrophobic interactions: C:I.35 Hydrogen bonds: C:G.32, S:R.18 Salt bridges: C:R.33, S:R.19, S:R.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, L.J. et al., Structural Basis for the Unusual Qy Red-Shift and Enhanced Thermostability of the LH1 Complex from Thermochromatium tepidum. Biochemistry (2016)

Release Date

2017-03-22

Peptides

Photosynthetic reaction center cytochrome c subunit: A
Photosynthetic reaction center L subunit: B
Photosynthetic reaction center M subunit: C
Photosynthetic reaction center H subunit: D
LH1 alpha polypeptide: EGIKMOQSUWY02468
LH1 beta polypeptide: FHJLNPRTVXZ13579

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
L

C
M

D
H

E
A

G
D

I
F

K
I

M
K

O
O

Q
Q

S
S

U
U

W
W

Y
Y

0
1

2
3

4
5

6
7

8
9

F
B

H
E

J
G

L
J

N
N

P
P

R
R

T
T

V
V

X
X

Z
Z

1
2

3
4

5
6

7
8

9
0

Membrane

We predict this structure to be a membrane protein.
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Photosynthetic reaction center cytochrome c subunit

Photosynthetic reaction center L subunit

Photosynthetic reaction center M subunit

Photosynthetic reaction center H subunit

LH1 alpha polypeptide

LH1 beta polypeptide

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