- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-1-1-1-1-16-16-mer
- Ligands
- 4 x HEC: HEME C(Covalent)
HEC.1: 22 residues within 4Å:- Chain A: Y.76, Q.77, N.78, V.79, Q.80, V.81, L.82, F.90, M.94, V.97, T.98, S.102, G.106, C.107, C.110, H.111, W.116, A.117, K.124, S.127, R.128
- Ligands: HEC.2
18 PLIP interactions:18 interactions with chain A,- Hydrophobic interactions: A:Y.76, A:Y.76, A:M.94, A:V.97, A:W.116, A:W.116, A:W.116, A:W.116
- Hydrogen bonds: A:Q.77, A:N.78, A:N.78, A:Q.80, A:V.81, A:L.82
- Salt bridges: A:K.124, A:R.128
- pi-Stacking: A:F.90
- Metal complexes: A:H.111
HEC.2: 25 residues within 4Å:- Chain A: V.101, Y.109, Y.122, T.123, V.126, S.127, M.130, F.131, V.134, T.151, C.152, C.155, H.156, P.160, V.161, P.162, I.284, L.291, R.295, L.303, R.304, V.305, C.310
- Ligands: HEC.1, HEC.4
13 PLIP interactions:13 interactions with chain A,- Hydrophobic interactions: A:V.101, A:V.101, A:V.126, A:M.130, A:F.131, A:V.134, A:I.284, A:L.303
- Hydrogen bonds: A:Y.109, A:Y.122
- Salt bridges: A:R.295, A:R.295
- Metal complexes: A:H.156
HEC.3: 24 residues within 4Å:- Chain A: I.210, R.211, I.212, T.213, T.232, F.233, M.236, I.239, S.240, L.243, V.245, G.246, C.247, C.250, H.251, F.256, N.257, R.266, A.269, W.270, R.274
- Chain B: L.174
- Chain C: I.191, Y.317
24 PLIP interactions:21 interactions with chain A, 2 interactions with chain C, 1 interactions with chain B,- Hydrophobic interactions: A:I.210, A:T.232, A:F.233, A:M.236, A:I.239, A:L.243, A:V.245, A:F.256, A:F.256, A:F.256, A:R.266, A:A.269, A:W.270, C:I.191, B:L.174
- Hydrogen bonds: A:I.212, A:T.213, C:Y.317
- Water bridges: A:N.257, A:R.266, A:R.274, A:R.274
- Salt bridges: A:R.274
- Metal complexes: A:H.251
HEC.4: 24 residues within 4Å:- Chain A: H.144, V.145, A.146, T.148, G.149, V.150, L.204, I.239, L.243, F.249, K.265, T.268, A.269, A.272, V.276, V.305, S.306, C.307, C.310, H.311, N.315, K.316, P.317
- Ligands: HEC.2
22 PLIP interactions:22 interactions with chain A,- Hydrophobic interactions: A:V.150, A:L.204, A:I.239, A:T.268, A:A.269, A:A.272, A:V.276, A:V.305, A:P.317
- Hydrogen bonds: A:T.148, A:N.315
- Water bridges: A:K.265, A:K.265, A:K.316, A:K.316, A:K.316
- Salt bridges: A:K.265, A:K.316, A:K.316
- pi-Cation interactions: A:H.144
- Metal complexes: A:H.144, A:H.311
- 1 x MG: MAGNESIUM ION(Non-covalent)
MG.5: 2 residues within 4Å:- Chain A: Q.183, E.230
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:E.230, H2O.1, H2O.1, H2O.2, H2O.16
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 7 residues within 4Å:- Chain A: E.31, N.42, Y.44, R.49, V.245, F.249, N.315
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:E.31, A:N.42, A:R.49, A:R.49
- Water bridges: A:L.243, A:G.244, A:N.315, A:N.315
GOL.39: 8 residues within 4Å:- Chain B: M.3, K.8, R.11
- Chain D: P.96, G.97, S.98, L.100
- Ligands: PGV.47
4 PLIP interactions:2 interactions with chain D, 2 interactions with chain B- Hydrogen bonds: D:G.97, D:S.98, B:R.11
- Water bridges: B:R.11
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.7: 0 residues within 4Å:- (No contacts)
No protein-ligand interaction detected (PLIP)SO4.13: 6 residues within 4Å:- Chain B: L.276, E.277, L.278, P.279, W.281
- Chain C: K.88
3 PLIP interactions:1 interactions with chain C, 2 interactions with chain B- Salt bridges: C:K.88
- Hydrogen bonds: B:W.281, B:W.281
SO4.31: 1 residues within 4Å:- Chain C: E.309
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:E.309
- Water bridges: C:T.312, C:T.312
- 1 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Covalent)
LHG.8: 7 residues within 4Å:- Chain A: C.23
- Chain B: W.264, W.271, W.274
- Ligands: PGV.9, UNL.16, PGV.118
1 PLIP interactions:1 interactions with chain B- Hydrophobic interactions: B:W.274
- 10 x PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE(Covalent)(Non-covalent)
PGV.9: 9 residues within 4Å:- Chain A: C.23
- Chain B: A.181, W.252, I.259, F.263, W.271
- Ligands: LHG.8, UQ8.18, PGV.32
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:W.252, B:F.263, B:W.271
PGV.14: 20 residues within 4Å:- Chain B: I.50, V.51, A.54, P.61, Q.66, Y.68, N.69, L.70, I.73, Y.157, G.158
- Chain E: I.38, S.41
- Chain G: M.37, L.40, N.45, D.48
- Ligands: BPH.11, BCL.20, PGV.53
10 PLIP interactions:8 interactions with chain B, 1 interactions with chain E, 1 interactions with chain G- Hydrophobic interactions: B:I.50, B:V.51, B:A.54, B:Y.68, B:L.70, B:I.73, E:I.38
- Hydrogen bonds: B:P.61, G:N.45
- Water bridges: B:T.67
PGV.15: 15 residues within 4Å:- Chain B: L.17, A.110, V.114, R.118, F.124, P.127, F.128, S.131, I.134, G.135, L.138
- Chain D: R.254, L.258
- Ligands: UQ8.17, PGV.32
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain D- Hydrophobic interactions: B:L.17, B:A.110, B:V.114, B:I.134, B:L.138
- Salt bridges: B:R.118
- Hydrogen bonds: D:R.254
PGV.32: 16 residues within 4Å:- Chain B: F.124, H.125, F.128, F.132, V.139, L.243, F.244, A.254
- Chain C: P.2, E.3, Q.5, I.7, I.43
- Ligands: PGV.9, PGV.15, CDL.34
17 PLIP interactions:12 interactions with chain B, 5 interactions with chain C- Hydrophobic interactions: B:F.128, B:F.128, B:F.128, B:F.132, B:F.132, B:V.139, B:L.243, B:F.244, B:F.244, B:F.244, C:I.7, C:I.43
- Water bridges: B:F.124, B:F.124, C:R.228
- Hydrogen bonds: C:E.3, C:Q.5
PGV.33: 15 residues within 4Å:- Chain B: L.194, V.229, G.230, Y.231
- Chain C: I.31, G.32, R.33, I.35, I.48, G.49, P.50, I.51
- Chain S: R.19
- Ligands: UQ8.12, CDL.86
9 PLIP interactions:3 interactions with chain B, 1 interactions with chain S, 5 interactions with chain C- Hydrophobic interactions: B:L.194, B:V.229, B:Y.231, C:I.35, C:I.48, C:I.51
- Hydrogen bonds: S:R.19, C:R.33, C:R.33
PGV.41: 17 residues within 4Å:- Chain B: N.69, W.71
- Chain C: P.200, M.203, H.301, G.302, M.303
- Chain D: Y.8, Q.13, I.16, W.17, W.20, F.24
- Ligands: BCL.20, CDL.42, PGV.53, LMT.58
11 PLIP interactions:1 interactions with chain B, 4 interactions with chain C, 6 interactions with chain D- Hydrogen bonds: B:N.69, C:G.302, D:Y.8, D:Y.8, D:Q.13
- Hydrophobic interactions: C:P.200, C:M.203, D:W.20, D:W.20, D:F.24
- Salt bridges: C:H.301
PGV.47: 18 residues within 4Å:- Chain 8: L.15, R.19, V.20, S.23
- Chain B: A.2, V.27, G.28
- Chain D: S.43, D.44, R.45, P.96
- Chain E: R.18, R.19, V.22, S.23
- Ligands: GOL.39, CDL.40, CDL.42
16 PLIP interactions:4 interactions with chain D, 4 interactions with chain B, 4 interactions with chain 8, 4 interactions with chain E- Hydrogen bonds: D:S.43, D:D.44, D:D.44, D:R.45, B:A.2, B:G.28, E:R.19
- Water bridges: B:A.2, B:R.11
- Hydrophobic interactions: 8:L.15, 8:V.20
- Salt bridges: 8:R.19, 8:R.19, E:R.18, E:R.18, E:R.19
PGV.53: 10 residues within 4Å:- Chain B: N.69, L.70, W.71
- Chain G: M.37, I.38, S.41
- Chain I: D.48
- Ligands: PGV.14, PGV.41, LMT.58
8 PLIP interactions:5 interactions with chain B, 2 interactions with chain G, 1 interactions with chain I- Hydrophobic interactions: B:L.70, B:W.71, G:I.38
- Hydrogen bonds: B:N.69, B:L.70, G:S.41, I:D.48
- Water bridges: B:R.72
PGV.118: 11 residues within 4Å:- Chain 0: M.37, L.40, N.45, D.48
- Chain A: C.23
- Chain Y: L.34, I.38, S.41
- Ligands: LHG.8, UNL.16, CRT.110
5 PLIP interactions:1 interactions with chain 0, 4 interactions with chain Y- Hydrogen bonds: 0:N.45, Y:S.41
- Hydrophobic interactions: Y:L.34, Y:L.34, Y:I.38
PGV.125: 16 residues within 4Å:- Chain 2: M.37, S.41, T.42, D.43
- Chain 4: M.37, L.40, N.45, D.48
- Chain A: P.26, P.27, K.46
- Chain B: L.146, L.147, G.149
- Ligands: CRT.116, UQ8.136
5 PLIP interactions:3 interactions with chain A, 1 interactions with chain B, 1 interactions with chain 2- Hydrophobic interactions: A:P.26, B:L.147, 2:M.37
- Salt bridges: A:K.46, A:K.46
- 36 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
BCL.10: 30 residues within 4Å:- Chain B: F.106, A.133, I.134, A.136, Y.137, L.140, V.166, S.167, V.169, G.170, Y.171, F.176, H.177, H.182, A.185, I.186, F.189, S.253, A.254, C.256, I.257
- Chain C: T.186, Y.197, Y.210
- Ligands: BPH.11, BCL.20, BCL.21, BCL.22, MQ8.24, CDL.42
17 PLIP interactions:16 interactions with chain B, 1 interactions with chain C,- Hydrophobic interactions: B:F.106, B:F.106, B:F.106, B:F.106, B:A.136, B:L.140, B:V.169, B:Y.171, B:F.176, B:A.185, B:I.186, B:F.189, B:F.189, B:I.257, C:Y.210
- Hydrogen bonds: B:S.253
- Metal complexes: B:H.182
BCL.20: 23 residues within 4Å:- Chain B: V.47, Y.137, L.140, F.155, I.159, L.160, H.162, L.163, V.166
- Chain C: Y.197, M.203, I.206, A.207, Y.210, G.211, L.214
- Ligands: BCL.10, BPH.11, PGV.14, BCL.22, MQ8.24, PGV.41, CDL.42
13 PLIP interactions:9 interactions with chain B, 4 interactions with chain C,- Hydrophobic interactions: B:V.47, B:Y.137, B:L.140, B:F.155, B:F.155, B:I.159, B:L.163, B:V.166, C:Y.197, C:I.206, C:L.214
- Metal complexes: B:H.162
- pi-Stacking: C:Y.210
BCL.21: 22 residues within 4Å:- Chain B: H.177, M.183, I.186, S.187, F.190, T.191, L.194
- Chain C: F.90, F.156, Y.157, L.160, V.175, I.179, H.182, L.183, W.185, T.186
- Ligands: BCL.10, UQ8.18, BCL.22, BPH.23, CRT.25
14 PLIP interactions:5 interactions with chain B, 9 interactions with chain C,- Hydrophobic interactions: B:I.186, B:L.194, C:F.90, C:F.156, C:Y.157, C:L.160, C:V.175, C:I.179, C:L.183, C:W.185
- Hydrogen bonds: B:T.191, B:T.191
- pi-Stacking: B:F.190
- Metal complexes: C:H.182
BCL.22: 32 residues within 4Å:- Chain B: V.166, Y.171, H.177, F.190
- Chain C: I.71, I.126, A.153, F.156, Y.157, L.160, W.185, T.186, A.187, F.189, S.190, L.196, Y.197, H.202, S.205, I.206, L.209, Y.210, T.276, V.277, A.280, G.283, I.284
- Ligands: BCL.10, BCL.20, BCL.21, BPH.23, CRT.25
21 PLIP interactions:21 interactions with chain C,- Hydrophobic interactions: C:I.71, C:I.126, C:I.126, C:F.156, C:F.156, C:F.156, C:Y.157, C:W.185, C:T.186, C:F.189, C:L.196, C:Y.197, C:Y.197, C:I.206, C:L.209, C:Y.210, C:T.276
- Hydrogen bonds: C:Y.197, C:S.205
- Salt bridges: C:H.202
- Metal complexes: C:H.202
BCL.43: 17 residues within 4Å:- Chain 8: I.35
- Chain 9: L.47
- Chain E: Q.28, I.29, G.32, H.36, W.46, L.47
- Chain F: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.45, UNL.48, CRT.142, BCL.143
11 PLIP interactions:3 interactions with chain F, 6 interactions with chain E, 1 interactions with chain 8, 1 interactions with chain 9,- Hydrophobic interactions: F:W.29, F:W.29, F:A.36, E:Q.28, E:I.29, E:W.46, E:W.46, E:W.46, 8:I.35, 9:L.47
- Metal complexes: E:H.36
BCL.45: 15 residues within 4Å:- Chain E: Q.28, L.31, G.32, I.35, H.36
- Chain F: W.29, F.30, V.33, H.37, W.46
- Chain G: L.47
- Ligands: BCL.43, BCL.50, UNL.54, CRT.139
12 PLIP interactions:8 interactions with chain F, 1 interactions with chain G, 3 interactions with chain E,- Hydrophobic interactions: F:F.30, F:V.33, F:V.33, F:W.46, F:W.46, F:W.46, F:W.46, G:L.47, E:I.35, E:I.35
- Metal complexes: F:H.37
- Hydrogen bonds: E:Q.28
BCL.50: 15 residues within 4Å:- Chain E: I.35
- Chain F: L.47
- Chain G: Q.28, I.29, H.36, W.46
- Chain H: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.45, BCL.51, UNL.54, CRT.139
13 PLIP interactions:1 interactions with chain E, 7 interactions with chain G, 1 interactions with chain F, 4 interactions with chain H,- Hydrophobic interactions: E:I.35, G:Q.28, G:I.29, G:W.46, G:W.46, G:W.46, G:W.46, F:L.47, H:W.29, H:W.29, H:L.32, H:A.36
- Metal complexes: G:H.36
BCL.51: 17 residues within 4Å:- Chain G: Q.28, L.31, G.32, I.35, H.36
- Chain H: F.30, V.33, V.34, H.37, W.46, L.47
- Chain I: L.47
- Chain J: L.39
- Ligands: CRT.46, BCL.50, BCL.56, UNL.60
15 PLIP interactions:11 interactions with chain H, 1 interactions with chain I, 2 interactions with chain G, 1 interactions with chain J,- Hydrophobic interactions: H:F.30, H:V.33, H:V.33, H:V.34, H:H.37, H:W.46, H:W.46, H:W.46, H:W.46, H:L.47, I:L.47, G:I.35, J:L.39
- Metal complexes: H:H.37
- Hydrogen bonds: G:Q.28
BCL.56: 17 residues within 4Å:- Chain G: I.35
- Chain H: F.30, L.47
- Chain I: Q.28, G.32, H.36, W.46, L.47
- Chain J: W.29, L.32, V.33, A.36, H.37
- Ligands: CRT.46, BCL.51, BCL.57, UNL.60
11 PLIP interactions:2 interactions with chain H, 2 interactions with chain J, 1 interactions with chain G, 6 interactions with chain I,- Hydrophobic interactions: H:F.30, H:L.47, J:W.29, J:A.36, G:I.35, I:Q.28, I:W.46, I:W.46, I:W.46, I:W.46
- Metal complexes: I:H.36
BCL.57: 16 residues within 4Å:- Chain I: Q.28, L.31, G.32, I.35, H.36
- Chain J: F.30, V.33, H.37, W.46, L.47
- Chain K: L.47
- Chain L: L.39
- Ligands: BCL.56, CRT.59, BCL.62, UNL.68
12 PLIP interactions:8 interactions with chain J, 1 interactions with chain K, 3 interactions with chain I,- Hydrophobic interactions: J:F.30, J:V.33, J:V.33, J:W.46, J:W.46, J:W.46, J:L.47, K:L.47, I:I.35, I:I.35
- Metal complexes: J:H.37
- Hydrogen bonds: I:Q.28
BCL.62: 18 residues within 4Å:- Chain I: I.35
- Chain J: L.47
- Chain K: Q.28, I.29, G.32, H.36, W.46, L.47
- Chain L: W.29, L.32, V.33, A.36, H.37, A.40
- Ligands: BCL.57, CRT.59, BCL.63, UNL.68
15 PLIP interactions:7 interactions with chain K, 6 interactions with chain L, 1 interactions with chain J, 1 interactions with chain I,- Hydrophobic interactions: K:Q.28, K:I.29, K:W.46, K:W.46, K:W.46, K:W.46, L:W.29, L:W.29, L:L.32, L:L.32, L:A.36, L:A.40, J:L.47, I:I.35
- Metal complexes: K:H.36
BCL.63: 16 residues within 4Å:- Chain K: Q.28, L.31, G.32, I.35, H.36, L.44
- Chain L: F.30, V.33, H.37, W.46, L.47
- Chain M: L.47
- Ligands: BCL.62, CRT.66, LDA.67, BCL.70
14 PLIP interactions:9 interactions with chain L, 4 interactions with chain K, 1 interactions with chain M,- Hydrophobic interactions: L:F.30, L:V.33, L:V.33, L:H.37, L:W.46, L:W.46, L:W.46, L:L.47, K:L.31, K:I.35, K:L.44, M:L.47
- Metal complexes: L:H.37
- Hydrogen bonds: K:Q.28
BCL.70: 16 residues within 4Å:- Chain K: I.35
- Chain L: L.47
- Chain M: Q.28, I.29, G.32, H.36, W.46
- Chain N: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.63, CRT.66, LDA.67, BCL.71
11 PLIP interactions:1 interactions with chain K, 6 interactions with chain M, 3 interactions with chain N, 1 interactions with chain L,- Hydrophobic interactions: K:I.35, M:Q.28, M:W.46, M:W.46, M:W.46, M:W.46, N:W.29, N:W.29, N:A.36, L:L.47
- Metal complexes: M:H.36
BCL.71: 18 residues within 4Å:- Chain M: Q.28, L.31, G.32, I.35, H.36, V.39, L.44
- Chain N: F.30, V.33, H.37, W.41, W.46, L.47
- Chain O: L.47
- Ligands: BCL.70, CRT.74, BCL.76, UNL.81
15 PLIP interactions:9 interactions with chain N, 5 interactions with chain M, 1 interactions with chain O,- Hydrophobic interactions: N:F.30, N:V.33, N:W.41, N:W.41, N:W.46, N:W.46, N:W.46, N:L.47, M:L.31, M:I.35, M:V.39, M:L.44, O:L.47
- Metal complexes: N:H.37
- Hydrogen bonds: M:Q.28
BCL.76: 15 residues within 4Å:- Chain M: I.35
- Chain N: L.47
- Chain O: Q.28, H.36, W.46, L.47
- Chain P: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.71, CRT.74, BCL.77, UNL.81
10 PLIP interactions:3 interactions with chain P, 5 interactions with chain O, 1 interactions with chain N, 1 interactions with chain M,- Hydrophobic interactions: P:W.29, P:W.29, P:A.36, O:Q.28, O:W.46, O:W.46, O:W.46, N:L.47, M:I.35
- Metal complexes: O:H.36
BCL.77: 17 residues within 4Å:- Chain O: Q.28, L.31, G.32, I.35, H.36, L.44
- Chain P: F.30, V.33, H.37, W.41, W.46, L.47
- Chain Q: L.47
- Ligands: BCL.76, CRT.80, BCL.83, UNL.87
15 PLIP interactions:9 interactions with chain P, 5 interactions with chain O, 1 interactions with chain Q,- Hydrophobic interactions: P:W.41, P:W.41, P:W.41, P:W.41, P:W.46, P:W.46, P:W.46, P:L.47, O:L.31, O:I.35, O:I.35, O:L.44, Q:L.47
- Metal complexes: P:H.37
- Hydrogen bonds: O:Q.28
BCL.83: 18 residues within 4Å:- Chain O: I.35
- Chain P: L.47
- Chain Q: Q.28, I.29, G.32, H.36, W.46, L.47
- Chain R: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.77, CRT.78, CRT.80, BCL.84, UNL.87
10 PLIP interactions:5 interactions with chain Q, 1 interactions with chain P, 3 interactions with chain R, 1 interactions with chain O,- Hydrophobic interactions: Q:Q.28, Q:W.46, Q:W.46, Q:W.46, P:L.47, R:W.29, R:W.29, R:A.36, O:I.35
- Metal complexes: Q:H.36
BCL.84: 15 residues within 4Å:- Chain Q: Q.28, L.31, G.32, I.35, H.36
- Chain R: F.30, V.33, H.37, W.41, W.46
- Chain S: L.47
- Ligands: CRT.78, BCL.83, BCL.89, UNL.92
15 PLIP interactions:10 interactions with chain R, 1 interactions with chain S, 4 interactions with chain Q,- Hydrophobic interactions: R:F.30, R:V.33, R:H.37, R:W.41, R:W.41, R:W.46, R:W.46, R:W.46, R:W.46, S:L.47, Q:L.31, Q:I.35, Q:I.35
- Metal complexes: R:H.37
- Hydrogen bonds: Q:Q.28
BCL.89: 18 residues within 4Å:- Chain Q: I.35
- Chain R: L.47
- Chain S: V.25, Q.28, I.29, H.36, W.46, L.47
- Chain T: W.29, L.32, V.33, A.36, H.37
- Ligands: CRT.78, BCL.84, CDL.86, BCL.90, UNL.92
12 PLIP interactions:7 interactions with chain S, 3 interactions with chain T, 1 interactions with chain Q, 1 interactions with chain R,- Hydrophobic interactions: S:V.25, S:I.29, S:W.46, S:W.46, S:W.46, S:W.46, T:W.29, T:W.29, T:A.36, Q:I.35, R:L.47
- Metal complexes: S:H.36
BCL.90: 16 residues within 4Å:- Chain S: Q.28, L.31, G.32, I.35, H.36
- Chain T: W.29, V.33, H.37, W.41, W.46, L.47
- Chain U: L.47
- Ligands: CRT.85, BCL.89, BCL.94, LDA.100
13 PLIP interactions:8 interactions with chain T, 4 interactions with chain S, 1 interactions with chain U,- Hydrophobic interactions: T:V.33, T:V.33, T:W.41, T:W.46, T:W.46, T:W.46, T:L.47, S:L.31, S:I.35, S:I.35, U:L.47
- Metal complexes: T:H.37
- Hydrogen bonds: S:Q.28
BCL.94: 17 residues within 4Å:- Chain S: I.35
- Chain T: L.47
- Chain U: Q.28, I.29, G.32, H.36, W.46
- Chain V: W.29, L.32, V.33, A.36, H.37
- Ligands: CRT.85, BCL.90, CDL.91, BCL.95, LDA.100
12 PLIP interactions:7 interactions with chain U, 3 interactions with chain V, 1 interactions with chain T, 1 interactions with chain S,- Hydrophobic interactions: U:Q.28, U:I.29, U:W.46, U:W.46, U:W.46, U:W.46, V:W.29, V:W.29, V:A.36, T:L.47, S:I.35
- Metal complexes: U:H.36
BCL.95: 18 residues within 4Å:- Chain U: Q.28, L.31, G.32, I.35, H.36, V.39
- Chain V: W.29, F.30, V.33, H.37, A.40, W.41, W.46
- Chain W: L.47
- Ligands: BCL.94, CRT.99, BCL.102, UNL.105
13 PLIP interactions:1 interactions with chain W, 9 interactions with chain V, 3 interactions with chain U,- Hydrophobic interactions: W:L.47, V:F.30, V:A.40, V:W.41, V:W.41, V:W.46, V:W.46, V:W.46, V:W.46, U:I.35, U:V.39
- Metal complexes: V:H.37
- Hydrogen bonds: U:Q.28
BCL.102: 16 residues within 4Å:- Chain U: I.35
- Chain V: L.47
- Chain W: Q.28, I.29, H.36, W.46, L.47
- Chain X: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.95, CRT.99, BCL.103, UNL.105
9 PLIP interactions:1 interactions with chain V, 3 interactions with chain W, 1 interactions with chain U, 4 interactions with chain X,- Hydrophobic interactions: V:L.47, W:I.29, W:W.46, U:I.35, X:W.29, X:L.32, X:L.32, X:A.36
- Metal complexes: W:H.36
BCL.103: 15 residues within 4Å:- Chain W: Q.28, L.31, G.32, I.35, H.36
- Chain X: W.29, F.30, V.33, H.37, W.46
- Chain Y: L.47
- Ligands: CRT.96, BCL.102, BCL.107, UNL.112
11 PLIP interactions:1 interactions with chain Y, 7 interactions with chain X, 3 interactions with chain W,- Hydrophobic interactions: Y:L.47, X:F.30, X:V.33, X:W.46, X:W.46, X:W.46, X:W.46, W:I.35, W:I.35
- Metal complexes: X:H.37
- Hydrogen bonds: W:Q.28
BCL.107: 15 residues within 4Å:- Chain W: I.35
- Chain X: L.47
- Chain Y: Q.28, H.36, W.46, L.47
- Chain Z: W.29, L.32, V.33, A.36, H.37
- Ligands: CRT.96, BCL.103, BCL.111, UNL.112
12 PLIP interactions:1 interactions with chain X, 5 interactions with chain Z, 1 interactions with chain W, 5 interactions with chain Y,- Hydrophobic interactions: X:L.47, Z:W.29, Z:W.29, Z:W.29, Z:L.32, Z:A.36, W:I.35, Y:Q.28, Y:W.46, Y:W.46, Y:W.46
- Metal complexes: Y:H.36
BCL.111: 16 residues within 4Å:- Chain 0: L.47
- Chain Y: Q.28, L.31, G.32, I.35, H.36, V.39
- Chain Z: F.30, V.33, H.37, W.41, W.46
- Ligands: BCL.107, CRT.110, BCL.114, UNL.120
13 PLIP interactions:9 interactions with chain Z, 3 interactions with chain Y, 1 interactions with chain 0,- Hydrophobic interactions: Z:F.30, Z:V.33, Z:H.37, Z:W.41, Z:W.46, Z:W.46, Z:W.46, Z:W.46, Y:I.35, Y:V.39, 0:L.47
- Metal complexes: Z:H.37
- Hydrogen bonds: Y:Q.28
BCL.114: 20 residues within 4Å:- Chain 0: Q.28, H.36, W.46, L.47
- Chain 1: W.29, L.32, V.33, A.36, H.37
- Chain Y: S.23, I.24, F.27, I.35
- Chain Z: L.47
- Ligands: CDL.108, CDL.109, CRT.110, BCL.111, BCL.115, UNL.120
12 PLIP interactions:3 interactions with chain Y, 5 interactions with chain 0, 3 interactions with chain 1, 1 interactions with chain Z,- Hydrophobic interactions: Y:I.24, Y:F.27, Y:I.35, 0:Q.28, 0:W.46, 0:W.46, 0:W.46, 1:W.29, 1:A.36, Z:L.47
- Metal complexes: 0:H.36
- Hydrogen bonds: 1:H.37
BCL.115: 17 residues within 4Å:- Chain 0: Q.28, L.31, G.32, I.35, H.36, V.39, L.44
- Chain 1: F.30, V.33, H.37, W.41, W.46
- Chain 2: L.47
- Ligands: BCL.114, CRT.119, BCL.122, UNL.126
15 PLIP interactions:10 interactions with chain 1, 4 interactions with chain 0, 1 interactions with chain 2,- Hydrophobic interactions: 1:F.30, 1:V.33, 1:H.37, 1:W.41, 1:W.41, 1:W.41, 1:W.46, 1:W.46, 1:W.46, 0:I.35, 0:V.39, 0:L.44, 2:L.47
- Metal complexes: 1:H.37
- Hydrogen bonds: 0:Q.28
BCL.122: 16 residues within 4Å:- Chain 0: I.35
- Chain 1: F.30, L.47
- Chain 2: Q.28, G.32, H.36, W.46, L.47
- Chain 3: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.115, CRT.119, BCL.123
14 PLIP interactions:6 interactions with chain 2, 5 interactions with chain 3, 2 interactions with chain 1, 1 interactions with chain 0,- Hydrophobic interactions: 2:Q.28, 2:W.46, 2:W.46, 2:W.46, 2:W.46, 3:W.29, 3:W.29, 3:W.29, 3:A.36, 1:F.30, 1:L.47, 0:I.35
- Metal complexes: 2:H.36
- Hydrogen bonds: 3:H.37
BCL.123: 17 residues within 4Å:- Chain 2: Q.28, L.31, G.32, I.35, H.36, L.44
- Chain 3: F.30, V.33, H.37, W.41, W.46, L.47
- Chain 4: L.47
- Ligands: CRT.116, BCL.122, BCL.128, UNL.132
13 PLIP interactions:4 interactions with chain 2, 8 interactions with chain 3, 1 interactions with chain 4,- Hydrophobic interactions: 2:L.31, 2:I.35, 2:L.44, 3:V.33, 3:H.37, 3:W.41, 3:W.46, 3:W.46, 3:W.46, 3:L.47, 4:L.47
- Hydrogen bonds: 2:Q.28
- Metal complexes: 3:H.37
BCL.128: 16 residues within 4Å:- Chain 2: I.35
- Chain 3: L.47
- Chain 4: Q.28, I.29, H.36, W.46, L.47
- Chain 5: W.29, L.32, V.33, A.36, H.37
- Ligands: CRT.116, BCL.123, BCL.129, UNL.132
14 PLIP interactions:5 interactions with chain 4, 7 interactions with chain 5, 1 interactions with chain 2, 1 interactions with chain 3,- Hydrophobic interactions: 4:Q.28, 4:W.46, 4:W.46, 4:W.46, 5:W.29, 5:W.29, 5:W.29, 5:L.32, 5:L.32, 5:A.36, 2:I.35, 3:L.47
- Metal complexes: 4:H.36
- Hydrogen bonds: 5:H.37
BCL.129: 17 residues within 4Å:- Chain 4: Q.28, L.31, G.32, I.35, H.36, V.39
- Chain 5: F.30, V.33, V.34, H.37, W.41, W.46
- Chain 6: L.47
- Ligands: BCL.128, CRT.131, BCL.134, UNL.137
14 PLIP interactions:3 interactions with chain 4, 10 interactions with chain 5, 1 interactions with chain 6,- Hydrophobic interactions: 4:I.35, 4:V.39, 5:F.30, 5:V.33, 5:V.34, 5:W.41, 5:W.41, 5:W.41, 5:W.46, 5:W.46, 5:W.46, 6:L.47
- Hydrogen bonds: 4:Q.28
- Metal complexes: 5:H.37
BCL.134: 21 residues within 4Å:- Chain 4: I.11, L.15, I.35
- Chain 5: L.47
- Chain 6: L.21, V.25, Q.28, I.29, H.36, W.46
- Chain 7: W.29, L.32, V.33, A.36, H.37
- Ligands: UQ8.17, BCL.129, CRT.131, BCL.135, UNL.137, CRT.140
15 PLIP interactions:8 interactions with chain 6, 3 interactions with chain 7, 1 interactions with chain 5, 3 interactions with chain 4,- Hydrophobic interactions: 6:L.21, 6:V.25, 6:Q.28, 6:I.29, 6:W.46, 6:W.46, 6:W.46, 7:W.29, 7:A.36, 5:L.47, 4:I.11, 4:L.15, 4:I.35
- Metal complexes: 6:H.36
- Hydrogen bonds: 7:H.37
BCL.135: 15 residues within 4Å:- Chain 6: Q.28, L.31, G.32, I.35, H.36
- Chain 7: F.30, V.33, H.37, A.40, W.46
- Chain 8: L.47
- Ligands: BCL.134, CRT.140, BCL.141, UNL.144
12 PLIP interactions:2 interactions with chain 6, 9 interactions with chain 7, 1 interactions with chain 8,- Hydrophobic interactions: 6:I.35, 7:F.30, 7:V.33, 7:A.40, 7:W.46, 7:W.46, 7:W.46, 7:W.46, 7:W.46, 8:L.47
- Hydrogen bonds: 6:Q.28
- Metal complexes: 7:H.37
BCL.141: 22 residues within 4Å:- Chain 6: S.23, I.24, F.27, I.35
- Chain 7: L.47
- Chain 8: V.25, Q.28, I.29, G.32, H.36, W.46, L.47
- Chain 9: W.29, L.32, V.33, A.36, H.37
- Ligands: BCL.135, UQ8.136, CRT.140, BCL.143, UNL.144
16 PLIP interactions:3 interactions with chain 9, 3 interactions with chain 6, 1 interactions with chain 7, 9 interactions with chain 8,- Hydrophobic interactions: 9:W.29, 9:W.29, 9:A.36, 6:I.24, 6:F.27, 6:I.35, 7:L.47, 8:V.25, 8:Q.28, 8:I.29, 8:I.29, 8:W.46, 8:W.46, 8:W.46, 8:W.46
- Metal complexes: 8:H.36
BCL.143: 15 residues within 4Å:- Chain 8: Q.28, L.31, G.32, I.35, H.36, V.39
- Chain 9: F.30, V.33, H.37, W.46
- Chain E: L.47
- Ligands: BCL.43, UNL.48, BCL.141, CRT.142
10 PLIP interactions:4 interactions with chain 8, 1 interactions with chain E, 5 interactions with chain 9,- Hydrophobic interactions: 8:I.35, 8:I.35, 8:V.39, E:L.47, 9:F.30, 9:W.46, 9:W.46, 9:W.46
- Hydrogen bonds: 8:Q.28
- Metal complexes: 9:H.37
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
BPH.11: 32 residues within 4Å:- Chain B: F.42, T.43, V.47, I.98, A.102, F.106, W.109, E.113, V.126, A.129, F.130, A.133, Y.137, F.155, Y.157, H.162, F.189, A.246, L.247, A.250
- Chain C: Y.210, A.213, L.214, A.217, M.218, W.252, T.255, M.256
- Ligands: BCL.10, PGV.14, BCL.20, MQ8.24
19 PLIP interactions:15 interactions with chain B, 4 interactions with chain C- Hydrophobic interactions: B:T.43, B:V.47, B:I.98, B:A.129, B:F.130, B:F.130, B:A.133, B:F.155, B:Y.157, B:Y.157, B:Y.157, B:F.189, B:L.247, B:A.250, C:Y.210, C:A.213, C:L.214, C:A.217
- pi-Stacking: B:F.130
BPH.23: 23 residues within 4Å:- Chain B: F.190, C.193, L.194, S.197, M.198, I.228
- Chain C: S.60, G.64, L.65, I.68, S.125, I.126, W.129, T.133, L.146, A.149, F.150, A.153, A.273, V.277
- Ligands: BCL.21, BCL.22, CDL.86
11 PLIP interactions:2 interactions with chain B, 9 interactions with chain C- Hydrophobic interactions: B:F.190, B:L.194, C:W.129, C:L.146, C:A.149, C:F.150, C:F.150, C:A.153, C:A.273, C:V.277
- pi-Stacking: C:F.150
- 5 x UQ8: Ubiquinone-8(Non-covalent)
UQ8.12: 19 residues within 4Å:- Chain B: S.187, F.188, T.191, M.198, H.199, L.202, I.203, E.221, N.222, F.225, Y.231, S.232, I.233, G.234, A.235, I.238, L.241
- Ligands: UQ8.18, PGV.33
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:F.188, B:M.198, B:L.202, B:F.225, B:F.225, B:I.233, B:L.241
- Hydrogen bonds: B:H.199, B:N.222, B:I.233, B:G.234
UQ8.17: 26 residues within 4Å:- Chain 4: S.23, I.24, F.27
- Chain 5: F.22, M.26
- Chain 6: A.26, I.29, V.30, M.37
- Chain B: V.38, L.84, R.85, M.86, W.95, Q.96, A.103, G.104, I.107, S.108, V.141, F.142, W.151
- Ligands: PGV.15, CRT.131, BCL.134, UQ8.136
13 PLIP interactions:6 interactions with chain B, 2 interactions with chain 4, 4 interactions with chain 6, 1 interactions with chain 5- Hydrophobic interactions: B:V.38, B:I.107, B:W.151, 4:I.24, 4:F.27, 6:A.26, 6:I.29, 6:I.29, 6:V.30, 5:F.22
- Hydrogen bonds: B:Q.96
- pi-Stacking: B:W.151, B:W.151
UQ8.18: 10 residues within 4Å:- Chain B: P.180, M.183, L.184, S.187, W.272
- Chain C: F.91, I.179
- Ligands: PGV.9, UQ8.12, BCL.21
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:M.183, B:L.184, B:W.272
- Hydrogen bonds: B:S.187
UQ8.36: 10 residues within 4Å:- Chain C: L.65, V.66, S.69, F.73
- Chain S: V.30, L.33, L.34, M.37
- Ligands: CRT.25, CDL.91
3 PLIP interactions:2 interactions with chain C, 1 interactions with chain S- Hydrophobic interactions: C:L.65, S:V.30
- Hydrogen bonds: C:S.69
UQ8.136: 20 residues within 4Å:- Chain 4: L.34
- Chain 6: S.23, A.26, F.27, V.30, L.33, L.34
- Chain 8: L.33
- Chain B: F.23, F.34, V.37, V.38, C.41, F.42, L.45, I.100, C.101
- Ligands: UQ8.17, PGV.125, BCL.141
12 PLIP interactions:7 interactions with chain 6, 3 interactions with chain B, 1 interactions with chain 4, 1 interactions with chain 8- Hydrophobic interactions: 6:F.27, 6:F.27, 6:V.30, 6:L.33, 6:L.34, B:F.42, B:L.45, B:I.100, 4:L.34, 8:L.33
- Hydrogen bonds: 6:F.27
- pi-Stacking: 6:F.27
- 16 x UNL: UNKNOWN LIGAND
UNL.16: 4 residues within 4Å:- Chain B: R.266, W.274
- Ligands: LHG.8, PGV.118
Ligand excluded by PLIPUNL.35: 5 residues within 4Å:- Chain C: W.130, I.154, F.155, I.163
- Ligands: PEF.73
Ligand excluded by PLIPUNL.48: 6 residues within 4Å:- Chain 9: L.47
- Chain F: A.36, L.39, Y.43
- Ligands: BCL.43, BCL.143
Ligand excluded by PLIPUNL.54: 7 residues within 4Å:- Chain F: L.47
- Chain H: A.36, L.39, A.40, Y.43
- Ligands: BCL.45, BCL.50
Ligand excluded by PLIPUNL.60: 8 residues within 4Å:- Chain H: W.41, L.47
- Chain J: A.36, L.39, A.40, Y.43
- Ligands: BCL.51, BCL.56
Ligand excluded by PLIPUNL.68: 6 residues within 4Å:- Chain J: L.47
- Chain L: A.36, L.39, Y.43
- Ligands: BCL.57, BCL.62
Ligand excluded by PLIPUNL.81: 5 residues within 4Å:- Chain N: L.47
- Chain P: A.36, Y.43
- Ligands: BCL.71, BCL.76
Ligand excluded by PLIPUNL.87: 7 residues within 4Å:- Chain P: L.47
- Chain R: A.36, L.39, A.40, Y.43
- Ligands: BCL.77, BCL.83
Ligand excluded by PLIPUNL.92: 6 residues within 4Å:- Chain R: L.47
- Chain T: A.36, L.39, Y.43
- Ligands: BCL.84, BCL.89
Ligand excluded by PLIPUNL.105: 6 residues within 4Å:- Chain V: L.47
- Chain X: A.36, L.39, Y.43
- Ligands: BCL.95, BCL.102
Ligand excluded by PLIPUNL.112: 6 residues within 4Å:- Chain X: L.47
- Chain Z: A.36, L.39, Y.43
- Ligands: BCL.103, BCL.107
Ligand excluded by PLIPUNL.120: 7 residues within 4Å:- Chain 1: A.36, L.39, A.40, Y.43
- Chain Z: L.47
- Ligands: BCL.111, BCL.114
Ligand excluded by PLIPUNL.126: 6 residues within 4Å:- Chain 1: W.41, L.47
- Chain 3: L.39, A.40, Y.43
- Ligands: BCL.115
Ligand excluded by PLIPUNL.132: 7 residues within 4Å:- Chain 3: L.47
- Chain 5: A.36, L.39, A.40, Y.43
- Ligands: BCL.123, BCL.128
Ligand excluded by PLIPUNL.137: 5 residues within 4Å:- Chain 5: L.47
- Chain 7: L.39, Y.43
- Ligands: BCL.129, BCL.134
Ligand excluded by PLIPUNL.144: 5 residues within 4Å:- Chain 7: L.47
- Chain 9: A.36, Y.43
- Ligands: BCL.135, BCL.141
Ligand excluded by PLIP- 1 x FE: FE (III) ION(Non-covalent)
FE.19: 5 residues within 4Å:- Chain B: H.199, H.239
- Chain C: H.219, E.234, H.266
5 PLIP interactions:3 interactions with chain C, 2 interactions with chain B- Metal complexes: C:H.219, C:E.234, C:H.266, B:H.199, B:H.239
- 1 x MQ8: MENAQUINONE 8(Non-covalent)
MQ8.24: 26 residues within 4Å:- Chain B: F.30, F.40, L.44, W.109
- Chain C: L.214, L.215, M.218, H.219, T.222, A.245, A.248, A.249, W.252, M.256, F.258, N.259, V.260, T.261, M.262, I.265
- Chain E: V.30
- Ligands: BCL.10, BPH.11, BCL.20, CDL.40, CDL.42
15 PLIP interactions:13 interactions with chain C, 1 interactions with chain E, 1 interactions with chain B- Hydrophobic interactions: C:L.214, C:L.215, C:M.218, C:A.248, C:A.249, C:W.252, C:F.258, C:F.258, C:V.260, C:V.260, C:I.265, E:V.30, B:F.40
- Hydrogen bonds: C:T.222, C:V.260
- 17 x CRT: SPIRILLOXANTHIN(Non-covalent)
CRT.25: 27 residues within 4Å:- Chain C: I.68, I.71, G.72, F.73, M.75, F.90, I.106, W.115, L.116, G.119, L.120, T.123, Y.157, G.161, F.162, W.171, V.175, F.177, G.178, I.179, H.182
- Chain O: L.34, I.38, S.41
- Ligands: BCL.21, BCL.22, UQ8.36
19 PLIP interactions:17 interactions with chain C, 2 interactions with chain O- Hydrophobic interactions: C:I.68, C:I.71, C:F.90, C:W.115, C:W.115, C:L.116, C:L.120, C:L.120, C:Y.157, C:Y.157, C:Y.157, C:F.162, C:W.171, C:V.175, C:V.175, C:F.177, C:I.179, O:L.34, O:I.38
CRT.46: 22 residues within 4Å:- Chain E: K.10, I.11, I.14
- Chain G: L.21, I.24, F.27, Q.28, L.31, I.35, I.38
- Chain H: E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain I: L.33, H.36, M.37
- Ligands: BCL.51, BCL.56
18 PLIP interactions:7 interactions with chain G, 4 interactions with chain E, 7 interactions with chain H- Hydrophobic interactions: G:L.21, G:I.24, G:I.24, G:F.27, G:F.27, G:L.31, G:I.35, E:K.10, E:K.10, E:I.11, E:I.14, H:E.17, H:I.21, H:I.21, H:F.22, H:F.22, H:M.26, H:F.30
CRT.59: 21 residues within 4Å:- Chain G: K.10, I.11, I.14
- Chain I: L.21, I.24, F.27, Q.28, L.31, I.35
- Chain J: E.14, E.17, F.18, I.21, F.22, S.25, M.26
- Chain K: L.33, H.36, M.37
- Ligands: BCL.57, BCL.62
18 PLIP interactions:3 interactions with chain G, 6 interactions with chain I, 8 interactions with chain J, 1 interactions with chain K- Hydrophobic interactions: G:I.11, G:I.11, G:I.14, I:L.21, I:I.24, I:F.27, I:F.27, I:L.31, I:I.35, J:E.17, J:F.18, J:I.21, J:I.21, J:F.22, J:F.22, J:F.22, J:M.26, K:H.36
CRT.66: 20 residues within 4Å:- Chain I: K.10, I.11
- Chain K: L.21, I.24, F.27, Q.28, L.31
- Chain L: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain M: L.33, H.36, M.37
- Ligands: BCL.63, BCL.70
17 PLIP interactions:3 interactions with chain I, 8 interactions with chain L, 5 interactions with chain K, 1 interactions with chain M- Hydrophobic interactions: I:K.10, I:I.11, I:I.11, L:E.17, L:I.21, L:I.21, L:F.22, L:F.22, L:M.26, L:F.30, L:F.30, K:L.21, K:L.21, K:I.24, K:F.27, K:L.31, M:H.36
CRT.74: 21 residues within 4Å:- Chain K: K.10, I.11, I.14
- Chain M: L.21, I.24, F.27, Q.28, I.38
- Chain N: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain O: L.33, H.36, M.37
- Ligands: BCL.71, BCL.76
16 PLIP interactions:9 interactions with chain N, 5 interactions with chain M, 2 interactions with chain K- Hydrophobic interactions: N:E.17, N:F.18, N:F.18, N:I.21, N:I.21, N:F.22, N:F.22, N:M.26, N:F.30, M:L.21, M:I.24, M:F.27, M:F.27, M:I.38, K:K.10, K:I.14
CRT.78: 22 residues within 4Å:- Chain O: K.10, I.11, I.14
- Chain Q: L.21, I.24, F.27, Q.28, L.34, I.35
- Chain R: E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain S: I.29, L.33, H.36
- Ligands: BCL.83, BCL.84, BCL.89
18 PLIP interactions:9 interactions with chain R, 6 interactions with chain Q, 1 interactions with chain S, 2 interactions with chain O- Hydrophobic interactions: R:F.18, R:F.18, R:I.21, R:I.21, R:F.22, R:F.22, R:M.26, R:F.30, R:F.30, Q:L.21, Q:I.24, Q:F.27, Q:F.27, Q:L.34, Q:I.35, S:H.36, O:K.10, O:I.11
CRT.80: 24 residues within 4Å:- Chain M: L.8, K.10, I.11, I.14
- Chain O: L.21, I.24, F.27, Q.28, L.31, I.35, I.38
- Chain P: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain Q: L.33, H.36, M.37
- Ligands: BCL.77, BCL.83
20 PLIP interactions:11 interactions with chain P, 4 interactions with chain M, 5 interactions with chain O- Hydrophobic interactions: P:E.17, P:F.18, P:F.18, P:I.21, P:I.21, P:F.22, P:F.22, P:F.22, P:M.26, P:F.30, P:F.30, M:L.8, M:K.10, M:I.11, M:I.14, O:L.21, O:I.24, O:F.27, O:F.27, O:I.35
CRT.85: 23 residues within 4Å:- Chain Q: K.10, I.11, I.14
- Chain S: L.21, I.24, F.27, Q.28, L.31, I.35
- Chain T: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain U: I.29, L.33, H.36
- Ligands: BCL.90, CDL.91, BCL.94
15 PLIP interactions:8 interactions with chain T, 5 interactions with chain S, 2 interactions with chain Q- Hydrophobic interactions: T:I.21, T:I.21, T:F.22, T:F.22, T:F.22, T:M.26, T:F.30, T:F.30, S:L.21, S:I.24, S:F.27, S:F.27, S:I.35, Q:K.10, Q:I.14
CRT.96: 23 residues within 4Å:- Chain U: L.8, K.10, I.11, I.14
- Chain W: L.21, I.24, F.27, Q.28, L.31, I.35
- Chain X: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain Y: L.33, H.36, M.37
- Ligands: BCL.103, BCL.107
19 PLIP interactions:7 interactions with chain W, 7 interactions with chain X, 4 interactions with chain U, 1 interactions with chain Y- Hydrophobic interactions: W:L.21, W:I.24, W:F.27, W:F.27, W:L.31, W:L.31, W:I.35, X:F.18, X:I.21, X:I.21, X:F.22, X:F.22, X:M.26, X:F.30, U:L.8, U:K.10, U:I.11, U:I.14, Y:H.36
CRT.99: 24 residues within 4Å:- Chain C: F.84
- Chain S: K.10, I.11, I.14
- Chain U: L.21, I.24, F.27, Q.28, L.31, I.35
- Chain V: L.10, E.14, E.17, F.18, I.21, F.22, S.25, M.26, W.29, F.30
- Chain W: L.33, H.36
- Ligands: BCL.95, BCL.102
22 PLIP interactions:1 interactions with chain W, 4 interactions with chain S, 10 interactions with chain V, 7 interactions with chain U- Hydrophobic interactions: W:H.36, S:K.10, S:I.11, S:I.11, S:I.14, V:E.14, V:F.18, V:F.18, V:I.21, V:I.21, V:F.22, V:F.22, V:M.26, V:F.30, V:F.30, U:L.21, U:I.24, U:F.27, U:F.27, U:L.31, U:L.31, U:I.35
CRT.110: 22 residues within 4Å:- Chain 0: L.33, H.36, M.37
- Chain W: K.10, I.11, I.14
- Chain Y: L.21, I.24, F.27, Q.28, L.31, I.38
- Chain Z: E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Ligands: BCL.111, BCL.114, PGV.118
18 PLIP interactions:6 interactions with chain Y, 3 interactions with chain W, 8 interactions with chain Z, 1 interactions with chain 0- Hydrophobic interactions: Y:L.21, Y:I.24, Y:F.27, Y:F.27, Y:L.31, Y:I.38, W:K.10, W:I.11, W:I.14, Z:F.18, Z:I.21, Z:I.21, Z:F.22, Z:F.22, Z:M.26, Z:F.30, Z:F.30, 0:L.33
CRT.116: 21 residues within 4Å:- Chain 0: K.10, I.11, L.13, I.14
- Chain 2: L.21, I.24, F.27, Q.28, L.31
- Chain 3: E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain 4: L.33, H.36
- Ligands: BCL.123, PGV.125, BCL.128
19 PLIP interactions:2 interactions with chain 4, 4 interactions with chain 2, 9 interactions with chain 3, 4 interactions with chain 0- Hydrophobic interactions: 4:L.33, 4:H.36, 2:L.21, 2:I.24, 2:F.27, 2:F.27, 3:F.18, 3:F.18, 3:I.21, 3:I.21, 3:F.22, 3:F.22, 3:M.26, 3:F.30, 3:F.30, 0:K.10, 0:I.11, 0:L.13, 0:I.14
CRT.119: 21 residues within 4Å:- Chain 0: L.21, I.24, F.27, Q.28, L.34, I.38
- Chain 1: E.14, E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain 2: H.36, M.37
- Chain Y: K.10, I.11, I.14
- Ligands: BCL.115, BCL.122
16 PLIP interactions:5 interactions with chain 0, 2 interactions with chain Y, 9 interactions with chain 1- Hydrophobic interactions: 0:L.21, 0:I.24, 0:F.27, 0:F.27, 0:L.34, Y:K.10, Y:I.14, 1:F.18, 1:F.18, 1:I.21, 1:I.21, 1:F.22, 1:F.22, 1:M.26, 1:F.30, 1:F.30
CRT.131: 20 residues within 4Å:- Chain 2: K.10, I.11, I.14
- Chain 4: L.21, I.24, F.27, Q.28
- Chain 5: E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain 6: I.29, L.33, H.36
- Ligands: UQ8.17, BCL.129, BCL.134
13 PLIP interactions:4 interactions with chain 4, 9 interactions with chain 5- Hydrophobic interactions: 4:L.21, 4:I.24, 4:F.27, 4:F.27, 5:F.18, 5:F.18, 5:I.21, 5:I.21, 5:F.22, 5:F.22, 5:M.26, 5:F.30, 5:F.30
CRT.139: 21 residues within 4Å:- Chain 8: K.10, I.11, I.14
- Chain E: L.21, I.24, F.27, Q.28, L.31, I.35
- Chain F: E.14, F.18, I.21, F.22, S.25, M.26, F.30
- Chain G: L.33, H.36, M.37
- Ligands: BCL.45, BCL.50
18 PLIP interactions:9 interactions with chain F, 6 interactions with chain E, 3 interactions with chain 8- Hydrophobic interactions: F:F.18, F:F.18, F:I.21, F:I.21, F:F.22, F:F.22, F:F.22, F:M.26, F:F.30, E:L.21, E:I.24, E:F.27, E:F.27, E:L.31, E:I.35, 8:K.10, 8:I.11, 8:I.14
CRT.140: 24 residues within 4Å:- Chain 4: K.10, I.11, I.14
- Chain 6: L.21, I.24, F.27, Q.28, L.31, I.35, I.38
- Chain 7: E.17, F.18, I.21, F.22, S.25, M.26, W.29, F.30
- Chain 8: L.33, H.36, M.37
- Ligands: BCL.134, BCL.135, BCL.141
17 PLIP interactions:4 interactions with chain 6, 10 interactions with chain 7, 3 interactions with chain 4- Hydrophobic interactions: 6:L.21, 6:I.24, 6:F.27, 6:I.35, 7:F.18, 7:F.18, 7:I.21, 7:I.21, 7:F.22, 7:F.22, 7:M.26, 7:W.29, 7:F.30, 7:F.30, 4:K.10, 4:K.10, 4:I.14
CRT.142: 20 residues within 4Å:- Chain 6: K.10, I.11, I.14
- Chain 8: L.21, I.24, F.27, Q.28, L.31
- Chain 9: E.17, F.18, I.21, F.22, S.25, M.26, F.30
- Chain E: L.33, H.36, M.37
- Ligands: BCL.43, BCL.143
12 PLIP interactions:6 interactions with chain 9, 1 interactions with chain 6, 5 interactions with chain 8- Hydrophobic interactions: 9:F.18, 9:I.21, 9:I.21, 9:F.22, 9:M.26, 9:F.30, 6:I.14, 8:L.21, 8:I.24, 8:F.27, 8:F.27, 8:L.31
- 13 x PEF: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE(Non-covalent)
PEF.26: 3 residues within 4Å:- Chain C: W.39
- Ligands: CDL.34, CDL.108
No protein-ligand interaction detected (PLIP)PEF.27: 3 residues within 4Å:- Chain C: S.37, Y.38, W.39
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:Y.38, C:W.39, C:W.39
PEF.28: 3 residues within 4Å:- Chain C: Y.134, Q.144, W.148
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:W.148
- Water bridges: C:Q.144
PEF.29: 7 residues within 4Å:- Chain C: Y.52, G.54, L.55, T.56, K.135, R.136
- Chain O: R.19
7 PLIP interactions:6 interactions with chain C, 1 interactions with chain O- Hydrogen bonds: C:L.55, C:T.56, C:T.56, C:R.136
- Water bridges: C:G.54
- Salt bridges: C:K.135, O:R.19
PEF.37: 17 residues within 4Å:- Chain C: S.143, H.145, W.148, R.267, W.270, W.271, I.278, I.282
- Chain D: T.15, F.19, L.21, F.22, G.25, L.26, Y.29
- Chain I: F.27, V.30
16 PLIP interactions:2 interactions with chain I, 7 interactions with chain C, 7 interactions with chain D- Hydrophobic interactions: I:F.27, I:V.30, C:W.270, C:W.271, C:I.278, C:I.282, D:T.15, D:F.22, D:F.22, D:F.22, D:L.26, D:Y.29, D:Y.29
- Water bridges: C:S.143
- Salt bridges: C:H.145, C:R.267
PEF.64: 4 residues within 4Å:- Chain K: L.15, D.16, R.19
- Chain M: R.18
3 PLIP interactions:2 interactions with chain K, 1 interactions with chain M- Hydrogen bonds: K:D.16
- Salt bridges: K:R.19, M:R.18
PEF.73: 12 residues within 4Å:- Chain C: M.167, L.285
- Chain K: I.38
- Chain M: M.37, L.40, S.41, N.45, D.48
- Ligands: LDA.30, UNL.35, LMT.38, LDA.65
5 PLIP interactions:3 interactions with chain M, 1 interactions with chain C, 1 interactions with chain K- Hydrogen bonds: M:N.45, M:D.48
- Water bridges: M:L.40
- Hydrophobic interactions: C:L.285, K:I.38
PEF.97: 5 residues within 4Å:- Chain U: I.14, L.15, D.16, R.19
- Chain W: R.18
2 PLIP interactions:1 interactions with chain W, 1 interactions with chain U- Salt bridges: W:R.18
- Hydrogen bonds: U:D.16
PEF.98: 1 residues within 4Å:- Chain U: R.19
1 PLIP interactions:1 interactions with chain U- Salt bridges: U:R.19
PEF.104: 3 residues within 4Å:- Chain C: W.39
- Chain W: R.19
- Ligands: CDL.108
2 PLIP interactions:1 interactions with chain W, 1 interactions with chain C- Salt bridges: W:R.19
- Hydrogen bonds: C:W.39
PEF.117: 3 residues within 4Å:- Chain 0: L.15, D.16, R.19
2 PLIP interactions:2 interactions with chain 0- Hydrogen bonds: 0:D.16
- Salt bridges: 0:R.19
PEF.124: 6 residues within 4Å:- Chain 2: I.14, L.15, D.16, R.19
- Chain 4: R.18
- Ligands: PEF.130
3 PLIP interactions:2 interactions with chain 2, 1 interactions with chain 4- Hydrogen bonds: 2:D.16, 2:R.19
- Salt bridges: 4:R.18
PEF.130: 3 residues within 4Å:- Chain 4: R.18
- Chain D: E.253
- Ligands: PEF.124
2 PLIP interactions:1 interactions with chain D, 1 interactions with chain 4- Hydrogen bonds: D:E.253
- Salt bridges: 4:R.18
- 5 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)
LDA.30: 9 residues within 4Å:- Chain C: V.166, M.167, M.168, G.169
- Chain M: L.34, S.41
- Ligands: LMT.38, PEF.73, LDA.79
1 PLIP interactions:1 interactions with chain M- Hydrophobic interactions: M:L.34
LDA.65: 8 residues within 4Å:- Chain C: V.290
- Chain D: D.10, A.11, T.15
- Chain K: L.34, S.41
- Ligands: LMT.38, PEF.73
1 PLIP interactions:1 interactions with chain K- Hydrophobic interactions: K:L.34
LDA.67: 6 residues within 4Å:- Chain L: L.47
- Chain N: A.36, L.39, Y.43
- Ligands: BCL.63, BCL.70
3 PLIP interactions:2 interactions with chain N, 1 interactions with chain L- Hydrophobic interactions: N:A.36, N:L.39, L:L.47
LDA.79: 8 residues within 4Å:- Chain C: L.104, V.166
- Chain M: I.38
- Chain O: M.37, L.40, N.45, D.48
- Ligands: LDA.30
4 PLIP interactions:1 interactions with chain O, 2 interactions with chain C, 1 interactions with chain M- Hydrophobic interactions: O:L.40, C:L.104, C:V.166, M:I.38
LDA.100: 5 residues within 4Å:- Chain T: L.47
- Chain V: A.36, Y.43
- Ligands: BCL.90, BCL.94
3 PLIP interactions:1 interactions with chain T, 2 interactions with chain V- Hydrophobic interactions: T:L.47, V:A.36, V:Y.43
- 9 x CDL: CARDIOLIPIN(Non-covalent)(Covalent)
CDL.34: 11 residues within 4Å:- Chain C: Y.4, Q.5, N.6, I.7, F.8, T.9, A.10, K.42
- Chain D: K.204
- Ligands: PEF.26, PGV.32
13 PLIP interactions:10 interactions with chain C, 3 interactions with chain D- Hydrophobic interactions: C:F.8, C:F.8, C:K.42
- Hydrogen bonds: C:Q.5, C:N.6, C:I.7, C:F.8, C:T.9
- Water bridges: C:K.42, D:F.202, D:K.204
- Salt bridges: C:K.42, D:K.204
CDL.40: 25 residues within 4Å:- Chain D: I.27, R.45, V.55, V.56, G.57, F.58
- Chain E: L.15, D.16, R.19, V.20, S.23, A.26, F.27, V.30
- Chain G: R.18, R.19, V.22, S.23, V.25, I.29, L.33
- Ligands: MQ8.24, CDL.42, PGV.47, CDL.52
20 PLIP interactions:9 interactions with chain D, 6 interactions with chain G, 5 interactions with chain E- Hydrophobic interactions: D:I.27, D:F.58, D:F.58, D:F.58, G:I.29, G:I.29, E:A.26, E:V.30, E:V.30
- Hydrogen bonds: D:K.54, D:V.56, D:G.57, D:F.58, E:D.16, E:S.23
- Salt bridges: D:R.45, G:R.18, G:R.18, G:R.19, G:R.19
CDL.42: 25 residues within 4Å:- Chain B: A.2, V.27, F.30, G.36
- Chain C: A.207, F.208, M.256, G.257, F.258, C.272
- Chain D: F.23, R.31, K.35, Y.39, L.41, V.55, G.57, F.58
- Chain E: R.19
- Ligands: BCL.10, BCL.20, MQ8.24, CDL.40, PGV.41, PGV.47
22 PLIP interactions:7 interactions with chain B, 5 interactions with chain C, 9 interactions with chain D, 1 interactions with chain E- Hydrophobic interactions: B:V.27, B:F.30, B:F.30, B:F.30, B:F.30, C:A.207, C:F.208, C:F.258, D:F.23
- Hydrogen bonds: B:A.2, B:A.2, D:Y.39, D:F.58
- Water bridges: C:R.253, C:R.253, D:R.31, D:R.31, D:R.31
- Salt bridges: D:R.31, D:R.31, D:K.35, E:R.19
CDL.52: 16 residues within 4Å:- Chain D: R.32, F.58, P.59, D.60
- Chain G: L.15, D.16, R.19, V.20, S.23
- Chain I: R.18, R.19, V.22, S.23, V.25, A.26
- Ligands: CDL.40
16 PLIP interactions:4 interactions with chain G, 5 interactions with chain D, 7 interactions with chain I- Hydrogen bonds: G:I.14, G:D.16, D:D.60, D:L.61, I:S.23
- Salt bridges: G:R.19, G:R.19, D:R.32, I:R.18, I:R.19, I:R.19
- Hydrophobic interactions: D:F.58, D:F.58, I:V.22, I:V.25, I:A.26
CDL.72: 26 residues within 4Å:- Chain C: L.55, L.59, L.128, W.130, V.131, Y.134, K.135, E.138
- Chain M: L.15, D.16, R.19, V.20, S.23, F.27, V.30
- Chain O: R.18, V.22, S.23, V.25, A.26, F.27, I.29, V.30, L.33
- Chain Q: I.29, L.33
27 PLIP interactions:6 interactions with chain M, 11 interactions with chain O, 8 interactions with chain C, 2 interactions with chain Q- Hydrophobic interactions: M:F.27, M:V.30, O:V.25, O:F.27, O:F.27, O:F.27, O:I.29, O:V.30, O:V.30, O:L.33, C:L.55, C:L.59, C:L.128, C:V.131, Q:I.29, Q:L.33
- Hydrogen bonds: M:D.16, M:S.23, O:R.18
- Salt bridges: M:R.19, M:R.19, O:R.19, C:K.135, C:K.135
- Water bridges: O:R.19, C:K.135, C:K.135
CDL.86: 20 residues within 4Å:- Chain B: V.229
- Chain C: I.31, G.32, I.51, F.62, V.66
- Chain Q: I.14, L.15, D.16, R.19, S.23, I.24, F.27
- Chain S: R.19, V.22, V.25, A.26
- Ligands: BPH.23, PGV.33, BCL.89
14 PLIP interactions:4 interactions with chain Q, 7 interactions with chain C, 2 interactions with chain S, 1 interactions with chain B- Hydrophobic interactions: Q:F.27, C:I.31, C:I.51, C:F.62, C:F.62, C:F.62, C:V.66, S:V.22, S:V.25, B:V.229
- Hydrogen bonds: Q:D.16, Q:S.23, C:G.32
- Salt bridges: Q:R.19
CDL.91: 14 residues within 4Å:- Chain S: L.15, D.16, R.19, V.20, S.23, V.30
- Chain U: R.19, V.22, S.23, V.25, A.26
- Ligands: UQ8.36, CRT.85, BCL.94
9 PLIP interactions:5 interactions with chain U, 4 interactions with chain S- Hydrophobic interactions: U:V.22, U:V.25, U:A.26, S:V.30
- Salt bridges: U:R.19, U:R.19, S:R.19
- Hydrogen bonds: S:D.16, S:S.23
CDL.108: 11 residues within 4Å:- Chain W: L.15, D.16, R.19, S.23
- Chain Y: R.18, R.19, V.22, S.23
- Ligands: PEF.26, PEF.104, BCL.114
5 PLIP interactions:4 interactions with chain W, 1 interactions with chain Y- Hydrogen bonds: W:D.16, W:S.23
- Salt bridges: W:R.19, W:R.19, Y:R.18
CDL.109: 7 residues within 4Å:- Chain 0: R.18
- Chain Y: L.15, D.16, R.19, V.20, S.23
- Ligands: BCL.114
3 PLIP interactions:3 interactions with chain Y- Hydrogen bonds: Y:D.16, Y:S.23
- Salt bridges: Y:R.19
- 2 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
LMT.38: 13 residues within 4Å:- Chain A: G.220, N.222
- Chain C: M.167, M.168, I.282, L.285, L.286, T.289, V.290
- Chain D: T.15
- Ligands: LDA.30, LDA.65, PEF.73
10 PLIP interactions:5 interactions with chain C, 1 interactions with chain D, 4 interactions with chain A- Hydrophobic interactions: C:I.282, C:L.285, C:L.286, C:V.290, D:T.15
- Hydrogen bonds: C:M.167, A:A.219, A:G.220, A:N.222, A:N.222
LMT.58: 14 residues within 4Å:- Chain C: K.300, H.301, G.302
- Chain D: Y.8, Q.13, W.17, A.18
- Chain I: L.34, M.37, I.38, L.40, S.41
- Ligands: PGV.41, PGV.53
8 PLIP interactions:4 interactions with chain D, 4 interactions with chain I- Hydrophobic interactions: D:W.17, D:W.17, D:W.17, D:A.18, I:L.34, I:M.37, I:I.38
- Water bridges: I:N.45
- 16 x CA: CALCIUM ION(Non-covalent)
CA.44: 4 residues within 4Å:- Chain 9: W.46
- Chain E: W.46, D.49, I.51
6 PLIP interactions:1 interactions with chain 9, 3 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: 9:W.46, E:W.46, E:D.49, E:I.51, H2O.28, H2O.28
CA.49: 4 residues within 4Å:- Chain F: W.46
- Chain G: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain G, 1 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: G:W.46, G:D.49, G:I.51, F:W.46, H2O.28, H2O.29
CA.55: 4 residues within 4Å:- Chain H: W.46
- Chain I: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain I, 1 interactions with chain H, 2 Ligand-Water interactions- Metal complexes: I:W.46, I:D.49, I:I.51, H:W.46, H2O.29, H2O.29
CA.61: 4 residues within 4Å:- Chain J: W.46
- Chain K: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain K, 1 interactions with chain J, 2 Ligand-Water interactions- Metal complexes: K:W.46, K:D.49, K:I.51, J:W.46, H2O.29, H2O.30
CA.69: 4 residues within 4Å:- Chain L: W.46
- Chain M: W.46, D.49, I.51
6 PLIP interactions:1 interactions with chain L, 3 interactions with chain M, 2 Ligand-Water interactions- Metal complexes: L:W.46, M:W.46, M:D.49, M:I.51, H2O.30, H2O.30
CA.75: 4 residues within 4Å:- Chain N: W.46
- Chain O: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain O, 1 interactions with chain N, 2 Ligand-Water interactions- Metal complexes: O:W.46, O:D.49, O:I.51, N:W.46, H2O.30, H2O.31
CA.82: 4 residues within 4Å:- Chain P: W.46
- Chain Q: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain Q, 1 interactions with chain P, 2 Ligand-Water interactions- Metal complexes: Q:W.46, Q:D.49, Q:I.51, P:W.46, H2O.31, H2O.31
CA.88: 4 residues within 4Å:- Chain R: W.46
- Chain S: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain S, 1 interactions with chain R, 2 Ligand-Water interactions- Metal complexes: S:W.46, S:D.49, S:I.51, R:W.46, H2O.32, H2O.32
CA.93: 4 residues within 4Å:- Chain T: W.46
- Chain U: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain U, 1 interactions with chain T, 2 Ligand-Water interactions- Metal complexes: U:W.46, U:D.49, U:I.51, T:W.46, H2O.33, H2O.33
CA.101: 4 residues within 4Å:- Chain V: W.46
- Chain W: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain W, 1 interactions with chain V, 2 Ligand-Water interactions- Metal complexes: W:W.46, W:D.49, W:I.51, V:W.46, H2O.34, H2O.34
CA.106: 4 residues within 4Å:- Chain X: W.46
- Chain Y: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain Y, 1 interactions with chain X, 2 Ligand-Water interactions- Metal complexes: Y:W.46, Y:D.49, Y:I.51, X:W.46, H2O.34, H2O.34
CA.113: 4 residues within 4Å:- Chain 0: W.46, D.49, I.51
- Chain Z: W.46
6 PLIP interactions:3 interactions with chain 0, 1 interactions with chain Z, 2 Ligand-Water interactions- Metal complexes: 0:W.46, 0:D.49, 0:I.51, Z:W.46, H2O.35, H2O.35
CA.121: 4 residues within 4Å:- Chain 1: W.46
- Chain 2: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain 2, 1 interactions with chain 1, 2 Ligand-Water interactions- Metal complexes: 2:W.46, 2:D.49, 2:I.51, 1:W.46, H2O.35, H2O.35
CA.127: 4 residues within 4Å:- Chain 3: W.46
- Chain 4: W.46, D.49, I.51
6 PLIP interactions:1 interactions with chain 3, 3 interactions with chain 4, 2 Ligand-Water interactions- Metal complexes: 3:W.46, 4:W.46, 4:D.49, 4:I.51, H2O.35, H2O.35
CA.133: 4 residues within 4Å:- Chain 5: W.46
- Chain 6: W.46, D.49, I.51
6 PLIP interactions:3 interactions with chain 6, 1 interactions with chain 5, 2 Ligand-Water interactions- Metal complexes: 6:W.46, 6:D.49, 6:I.51, 5:W.46, H2O.36, H2O.36
CA.138: 4 residues within 4Å:- Chain 7: W.46
- Chain 8: W.46, D.49, I.51
6 PLIP interactions:1 interactions with chain 7, 3 interactions with chain 8, 2 Ligand-Water interactions- Metal complexes: 7:W.46, 8:W.46, 8:D.49, 8:I.51, H2O.36, H2O.37
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yu, L.-J. et al., Structure of photosynthetic LH1-RC supercomplex at 1.9 angstrom resolution. Nature (2018)
- Release Date
- 2018-04-11
- Peptides
- Photosynthetic reaction center cytochrome c subunit: A
Photosynthetic reaction center L subunit: B
Photosynthetic reaction center M subunit: C
Photosynthetic reaction center H subunit: D
LH1 alpha polypeptide: EGIKMOQSUWY02468
LH1 beta polypeptide: FHJLNPRTVXZ13579 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
LC
MD
HE
AG
DI
FK
IM
KO
OQ
QS
SU
UW
WY
Y0
12
34
56
78
9F
BH
EJ
GL
JN
NP
PR
RT
TV
VX
XZ
Z1
23
45
67
89
0 - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-1-1-1-1-16-16-mer
- Ligands
- 4 x HEC: HEME C(Covalent)
- 1 x MG: MAGNESIUM ION(Non-covalent)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- 1 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Covalent)
- 10 x PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE(Covalent)(Non-covalent)
- 36 x BCL: BACTERIOCHLOROPHYLL A(Non-covalent)
- 2 x BPH: BACTERIOPHEOPHYTIN A(Non-covalent)
- 5 x UQ8: Ubiquinone-8(Non-covalent)
- 16 x UNL: UNKNOWN LIGAND
- 1 x FE: FE (III) ION(Non-covalent)
- 1 x MQ8: MENAQUINONE 8(Non-covalent)
- 17 x CRT: SPIRILLOXANTHIN(Non-covalent)
- 13 x PEF: DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE(Non-covalent)
- 5 x LDA: LAURYL DIMETHYLAMINE-N-OXIDE(Non-covalent)
- 9 x CDL: CARDIOLIPIN(Non-covalent)(Covalent)
- 2 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
- 16 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Yu, L.-J. et al., Structure of photosynthetic LH1-RC supercomplex at 1.9 angstrom resolution. Nature (2018)
- Release Date
- 2018-04-11
- Peptides
- Photosynthetic reaction center cytochrome c subunit: A
Photosynthetic reaction center L subunit: B
Photosynthetic reaction center M subunit: C
Photosynthetic reaction center H subunit: D
LH1 alpha polypeptide: EGIKMOQSUWY02468
LH1 beta polypeptide: FHJLNPRTVXZ13579 - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
LC
MD
HE
AG
DI
FK
IM
KO
OQ
QS
SU
UW
WY
Y0
12
34
56
78
9F
BH
EJ
GL
JN
NP
PR
RT
TV
VX
XZ
Z1
23
45
67
89
0 - Membrane
-
We predict this structure to be a membrane protein.