SMTL ID : 5fe9.1

Crystal structure of human PCAF bromodomain in complex with compound SL1122 (compound 13)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

homo-dimer

Ligands

2 x 5WS: ~{N}-(1,4-dimethyl-2-oxidanylidene-quinolin-7-yl)methanesulfonamide(Non-covalent)

5WS.1: 10 residues within 4Å: Chain A: P.35, E.38, P.39, V.40, K.41, E.44, A.45, Y.90, N.91, Y.97 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:A.45, A:Y.90, A:Y.90 Hydrogen bonds: A:K.41, A:N.91 Water bridges: A:E.38 pi-Stacking: A:Y.97, A:Y.97 5WS.3: 10 residues within 4Å: Chain B: P.35, E.38, P.39, V.40, K.41, E.44, A.45, Y.90, N.91, Y.97 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:E.44, B:A.45, B:Y.90 Hydrogen bonds: B:K.41, B:E.44, B:N.91 Water bridges: B:E.38 pi-Stacking: B:Y.97

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 2 residues within 4Å: Chain A: Y.17, R.68 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaikuad, A. et al., Structure-Based Identification of Inhibitory Fragments Targeting the p300/CBP-Associated Factor Bromodomain. J.Med.Chem. (2016)

Release Date

2016-01-13

Peptides

Histone acetyltransferase KAT2B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Histone acetyltransferase KAT2B

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