SMTL ID : 5fnf.1

Dynamic Undocking and the Quasi-Bound State as tools for Drug Design

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: L.103, F.138, Y.139, W.162 2 PLIP interactions: 2 interactions with chain A Water bridges: A:L.103, A:W.162 SO4.2: 5 residues within 4Å: Chain A: E.75, H.77, N.79, T.219, F.221 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:E.75, A:N.79, A:N.79 Water bridges: A:H.77, A:H.77, A:I.78, A:T.219 Salt bridges: A:H.77

1 x TQL: 4-[(E)-N-oxidanyl-C-pyridin-3-yl-carbonimidoyl]benzene-1,3-diol(Non-covalent)

TQL.3: 12 residues within 4Å: Chain A: L.48, N.51, S.52, A.55, D.93, I.96, G.97, M.98, L.107, F.138, T.184, V.186 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.107, A:T.184 Hydrogen bonds: A:N.51, A:G.97, A:G.97, A:T.184 Water bridges: A:D.93, A:G.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruiz-Carmona, S. et al., Dynamic undocking and the quasi-bound state as tools for drug discovery. Nat Chem (2017)

Release Date

2016-11-23

Peptides

HEAT SHOCK PROTEIN, HSP90-ALPHA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

HEAT SHOCK PROTEIN, HSP90-ALPHA

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