SMTL ID : 6el5.1

Estimation of relative drug-target residence times by random acceleration molecular dynamics simulation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

1 x PU1: 8-(2-CHLORO-3,4,5-TRIMETHOXY-BENZYL)-2-FLUORO-9-PENT-4-YLNYL-9H-PURIN-6-YLAMINE(Non-covalent)

PU1.1: 15 residues within 4Å: Chain A: N.51, S.52, A.55, D.93, I.96, G.97, M.98, L.103, L.107, G.135, F.138, Y.139, V.150, W.162, T.184 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.107, A:F.138 Hydrogen bonds: A:N.51, A:D.93, A:Y.139 Water bridges: A:A.55, A:D.93, A:D.93, A:G.97 pi-Stacking: A:F.138 Halogen bonds: A:G.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kokh, D.B. et al., Estimation of Drug-Target Residence Times by tau-Random Acceleration Molecular Dynamics Simulations. J Chem Theory Comput (2018)

Release Date

2018-05-30

Peptides

Heat shock protein HSP 90-alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock protein HSP 90-alpha

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