SMTL ID : 5h15.1 (1 other biounit)

EED in complex with PRC2 allosteric inhibitor EED709

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.27 Å

Oligo State

hetero-1-1-mer

Ligands

1 x LQD: (3R,4S)-1-[(2-methoxyphenyl)methyl]-N,N-dimethyl-4-(1-methylindol-3-yl)pyrrolidin-3-amine(Non-covalent)

LQD.1: 10 residues within 4Å: Chain A: F.23, Y.74, N.120, E.164, L.166, D.236, Y.291, M.292, R.293, R.340 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.74, A:L.166, A:D.236, A:Y.291, A:R.293 Salt bridges: A:E.164 pi-Stacking: A:F.23, A:F.23, A:Y.291 pi-Cation interactions: A:Y.291, A:R.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, L. et al., Discovery and Molecular Basis of a Diverse Set of Polycomb Repressive Complex 2 Inhibitors Recognition by EED. PLoS ONE (2017)

Release Date

2017-01-25

Peptides

Polycomb protein EED: A
Histone-lysine N-methyltransferase EZH2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Polycomb protein EED

Histone-lysine N-methyltransferase EZH2

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