SMTL ID : 5ttw.1 (1 other biounit)

Crystal Structure of EED in Complex with UNC4859

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.74 Å

Oligo State

monomer

Ligands

1 x PRO- SER- M3L- PHE- NLW: UNC4859(Non-covalent)

PRO-SER-M3L-PHE-NLW.1: 9 residues within 4Å: Chain A: F.23, Y.74, N.233, Y.234, I.289, W.290, Y.291, Q.308, R.340 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.289, A:W.290, A:W.290, A:Q.308, A:Q.308 Hydrogen bonds: A:W.290, A:R.340, A:R.340 Water bridges: A:W.290 pi-Cation interactions: A:F.23, A:Y.74, A:Y.291

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 1 residues within 4Å: Chain A: R.195 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:R.195

11 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 8 residues within 4Å: Chain A: F.23, G.24, Y.74, T.75, Y.291, R.293, Q.341 Ligands: UNX.5 No protein-ligand interaction detected (PLIP) UNX.4: 3 residues within 4Å: Chain A: L.151, I.154, S.217 No protein-ligand interaction detected (PLIP) UNX.5: 3 residues within 4Å: Chain A: T.75, C.76 Ligands: UNX.3 No protein-ligand interaction detected (PLIP) UNX.6: 2 residues within 4Å: Chain A: H.53, S.54 No protein-ligand interaction detected (PLIP) UNX.7: 5 residues within 4Å: Chain A: H.86, P.87, N.102, I.104 Ligands: UNX.11 No protein-ligand interaction detected (PLIP) UNX.8: 4 residues within 4Å: Chain A: C.10, V.11, N.12 Ligands: UNX.13 No protein-ligand interaction detected (PLIP) UNX.9: 3 residues within 4Å: Chain A: S.226, T.227, R.228 No protein-ligand interaction detected (PLIP) UNX.10: 3 residues within 4Å: Chain A: S.285, K.311, Y.313 No protein-ligand interaction detected (PLIP) UNX.11: 4 residues within 4Å: Chain A: D.81, T.84, H.86 Ligands: UNX.7 No protein-ligand interaction detected (PLIP) UNX.12: 3 residues within 4Å: Chain A: L.151, F.215, S.217 No protein-ligand interaction detected (PLIP) UNX.13: 2 residues within 4Å: Chain A: H.332 Ligands: UNX.8 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barnash, K.D. et al., Discovery of Peptidomimetic Ligands of EED as Allosteric Inhibitors of PRC2. ACS Comb Sci (2017)

Release Date

2017-01-11

Peptides

Polycomb protein EED: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polycomb protein EED

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