SMTL ID : 5jq5.1

Crystal structure of CDK2 in complex with inhibitor ICEC0942

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: K.129, T.158, E.162, V.163, V.164, T.165 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.158, A:E.162 Hydrogen bonds: A:E.162, A:T.165 Salt bridges: A:K.129

1 x I74: (3R,4R)-4-[[[7-[(phenylmethyl)amino]-3-propan-2-yl-pyrazolo[1,5-a]pyrimidin-5-yl]amino]methyl]piperidin-3-ol(Non-covalent)

I74.2: 16 residues within 4Å: Chain A: I.10, E.12, V.18, A.31, F.80, E.81, F.82, L.83, H.84, Q.85, K.89, Q.131, N.132, L.134, A.144, D.145 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.10, A:I.10, A:I.10, A:V.18, A:A.31, A:F.80, A:F.80, A:F.82, A:A.144 Hydrogen bonds: A:E.12, A:L.83, A:L.83, A:N.132 Water bridges: A:I.10, A:E.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hazel, P. et al., Inhibitor Selectivity for Cyclin-Dependent Kinase 7: A Structural, Thermodynamic, and Modelling Study. ChemMedChem (2017)

Release Date

2017-02-08

Peptides

Cyclin-dependent kinase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cyclin-dependent kinase 2

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