SMTL ID : 5mfh.1 (3 other biounits)

Designed armadillo repeat protein YIIIM5AII in complex with peptide (RR)5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

8 x CA: CALCIUM ION(Non-covalent)

CA.1: 2 residues within 4Å: Chain A: P.226, E.228 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.226, A:E.228 CA.2: 2 residues within 4Å: Chain A: P.58, E.60 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.58, A:E.60, H2O.3 CA.3: 2 residues within 4Å: Chain A: E.275, E.278 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.275 CA.4: 2 residues within 4Å: Chain A: Q.11, N.14 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:Q.11 CA.5: 2 residues within 4Å: Chain A: P.184, E.186 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:P.184, A:E.186 CA.6: 2 residues within 4Å: Chain A: P.142, E.144 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.142, A:E.144, H2O.3 CA.7: 2 residues within 4Å: Chain A: P.100, E.102 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.100, A:E.102, H2O.1 CA.8: 2 residues within 4Å: Chain A: P.16, Q.18 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:P.16, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hansen, S. et al., Curvature of designed armadillo repeat proteins allows modular peptide binding. J. Struct. Biol. (2018)

Release Date

2017-09-13

Peptides

YIIIM5AII: A
(RR)5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

YIIIM5AII

(RR)5

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