SMTL ID : 5mzl.1

Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and fragment like molekule N-quinolin-5-ylpyridine-3-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 8ET: ~{N}-quinolin-5-ylpyridine-3-carboxamide(Non-covalent)

8ET.1: 13 residues within 4Å: Chain A: L.44, V.52, A.65, K.67, I.104, L.120, E.121, R.122, P.123, V.126, L.174, I.185, D.186 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.65, A:R.122 Hydrogen bonds: A:K.67 Water bridges: A:D.186

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 8 residues within 4Å: Chain A: Y.233, P.241, F.242, E.247, Q.252, V.253, F.254, R.256 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:E.247, A:E.247, A:F.254, A:F.254, A:R.256, A:R.256

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siefker, C. et al., A crystallographic fragment study with human Pim-1 kinase. to be published

Release Date

2018-02-14

Peptides

Serine/threonine-protein kinase pim-1: A
Pimtide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase pim-1

Pimtide

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