SMTL ID : 5n4r.1

Crystal structure of human Pim-1 kinase in complex with a consensus peptide and fragment like molecule 2-(azepan-1-yl)-1-(1H-indol-3-yl)propan-1-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.13 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain A: Y.233, P.241, F.242, E.247, Q.252, V.253, F.254, R.256 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.233, A:Q.252, A:F.254, A:R.256

1 x 8MQ: 2-(azepan-1-yl)-1-(1~{H}-indol-3-yl)propan-1-one(Non-covalent)

8MQ.2: 5 residues within 4Å: Chain A: L.44, A.65, E.121, L.174, I.185 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.44, A:A.65, A:L.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siefker, C. et al., A crystallographic fragment study with human Pim-1 kinase. to be published

Release Date

2018-02-28

Peptides

Serine/threonine-protein kinase pim-1: A
Pimtide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

Serine/threonine-protein kinase pim-1

Pimtide

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