SMTL ID : 5n5m.1

Crystal structure of human Pim-1 kinase in complex with a consensuspeptide and (R)-3-(2-((isoquinolin-5-ylmethyl)(methyl)carbamoyl)phenyl)pyrrolidin-1-ium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.21 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 8O8: ~{N}-(isoquinolin-5-ylmethyl)-~{N}-methyl-2-[(3~{R})-pyrrolidin-3-yl]benzamide(Non-covalent)

8O8.1: 13 residues within 4Å: Chain A: L.44, G.45, F.49, V.52, A.65, E.121, R.122, E.171, N.172, L.174, I.185, D.186 Chain B: R.6 9 PLIP interactions: 8 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:L.44, A:F.49, A:V.52, A:A.65, A:L.174, A:I.185 Hydrogen bonds: A:N.172, A:D.186 pi-Cation interactions: B:R.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Siefker, C. et al., A crystallographic fragment study with human Pim-1 kinase. to be published

Release Date

2018-03-07

Peptides

Serine/threonine-protein kinase pim-1: A
Pimtide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase pim-1

Pimtide

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