SMTL ID : 5n9p.1

ENAH EVH1 in complex with Ac-[2-Cl-F]-PP-[ProM-1]-NH2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

3 x ACE- 2L5- PRO- PRO- 92B- NH2: Ac-[2-Cl-F]-PP-[ProM-1]-NH2(Non-covalent)

ACE-2L5-PRO-PRO-92B-NH2.1: 20 residues within 4Å: Chain A: M.16, Y.18, W.25, K.71, N.73, A.75, T.76, F.79, Q.81, W.82, R.83, V.88, N.92 Chain B: Y.18, D.20, R.83, V.88 Ligands: ACE-2L5-PRO-PRO-92B-NH2.3, ACE-2L5-PRO-PRO-92B-NH2.3, CL.4 11 PLIP interactions: 10 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:Y.18, A:Y.18, A:W.25, A:K.71, A:N.73, A:F.79, A:F.79, B:Y.18 Hydrogen bonds: A:W.25, A:Q.81, A:R.83 ACE-2L5-PRO-PRO-92B-NH2.2: 11 residues within 4Å: Chain A: E.5, H.38, Y.40, R.49, V.51, G.52, R.53, V.60, N.63, C.64, A.65 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.40, A:V.51, A:R.53 Hydrogen bonds: A:R.49, A:R.49, A:R.53, A:R.53, A:N.63 ACE-2L5-PRO-PRO-92B-NH2.3: 19 residues within 4Å: Chain A: Y.18, D.20, K.23 Chain B: M.16, Y.18, W.25, K.71, N.73, A.75, T.76, F.79, Q.81, W.82, R.83, V.88, N.92 Ligands: ACE-2L5-PRO-PRO-92B-NH2.1, ACE-2L5-PRO-PRO-92B-NH2.1, ACE-2L5-PRO-PRO-92B-NH2.1 16 PLIP interactions: 13 interactions with chain B, 3 interactions with chain A Hydrophobic interactions: B:Y.18, B:Y.18, B:W.25, B:N.73, B:F.79, B:F.79, B:F.79, B:R.83, A:Y.18, A:D.20 Hydrogen bonds: B:W.25, B:Q.81, B:R.83, B:R.83 pi-Cation interactions: B:R.83 Water bridges: A:D.20

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: K.24, W.25 Ligands: ACE-2L5-PRO-PRO-92B-NH2.1, ACE-2L5-PRO-PRO-92B-NH2.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barone, M. et al., Designed nanomolar small-molecule inhibitors of Ena/VASP EVH1 interaction impair invasion and extravasation of breast cancer cells. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2017-06-14

Peptides

Protein enabled homolog: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Protein enabled homolog

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