SMTL ID : 5r66.1 (1 other biounit)

PanDDA analysis group deposition -- Crystal Structure of HUMAN CLEAVAGE FACTOR IM in complex with FMOPL000198a

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.02 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: M.46, W.119, H.141 No protein-ligand interaction detected (PLIP) ZN.2: 1 residues within 4Å: Chain A: H.59 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.59 ZN.5: 3 residues within 4Å: Chain B: M.46, W.119, H.141 No protein-ligand interaction detected (PLIP) ZN.6: 1 residues within 4Å: Chain B: H.59 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.59

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.3: 5 residues within 4Å: Chain A: E.4, F.192 Chain B: N.117, W.119, H.141 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:W.119 Water bridges: A:F.194 ACT.4: 4 residues within 4Å: Chain A: E.170, Y.172, D.173, N.174 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:F.169, A:N.174 ACT.7: 5 residues within 4Å: Chain A: N.117, W.119, H.141 Chain B: E.4, F.192 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain A Water bridges: B:F.194 Hydrophobic interactions: A:W.119 ACT.8: 4 residues within 4Å: Chain B: E.170, Y.172, D.173, N.174 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:F.169, B:N.174

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Talon, R. et al., PanDDA analysis group deposition. To Be Published

Release Date

2020-04-15

Peptides

Cleavage and polyadenylation specificity factor subunit 5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Cleavage and polyadenylation specificity factor subunit 5

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